Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97290 | Soybean | nucleus | 46.44 | 58.86 |
| Solyc06g063070.2.1 | Tomato | nucleus | 54.09 | 55.11 |
| PGSC0003DMT400012547 | Potato | nucleus | 53.83 | 54.84 |
| KRH06265 | Soybean | nucleus | 54.35 | 53.93 |
| Solyc03g123500.2.1 | Tomato | nucleus | 54.62 | 53.63 |
| PGSC0003DMT400023609 | Potato | nucleus | 54.62 | 53.08 |
| KRH47694 | Soybean | nucleus | 54.62 | 52.81 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 44.59 | 51.84 |
| Os02t0782700-01 | Rice | nucleus | 44.85 | 46.58 |
| VIT_07s0005g00820.t01 | Wine grape | nucleus | 31.66 | 46.33 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 40.63 | 43.38 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 40.11 | 43.06 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 40.11 | 42.82 |
| EES07642 | Sorghum | nucleus | 41.42 | 42.66 |
| Zm00001d052087_P001 | Maize | nucleus | 40.63 | 42.66 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 41.16 | 42.28 |
| TraesCSU01G183700.1 | Wheat | nucleus | 31.66 | 42.25 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 36.68 | 41.99 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 34.56 | 41.99 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 30.87 | 41.94 |
| EER87998 | Sorghum | nucleus | 39.31 | 41.62 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 39.84 | 41.6 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 30.61 | 41.58 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 41.95 | 40.66 |
| Os06t0194000-02 | Rice | nucleus | 38.79 | 40.61 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 33.25 | 40.38 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 40.9 | 40.16 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 39.84 | 40.05 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 41.95 | 39.95 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 41.95 | 39.95 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 40.11 | 39.9 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 41.69 | 39.7 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 33.77 | 39.63 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 29.82 | 39.51 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 33.77 | 39.51 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 33.25 | 39.38 |
| Os09t0434500-01 | Rice | vacuole | 40.9 | 39.14 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 24.27 | 38.98 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 40.11 | 38.97 |
| KXG35689 | Sorghum | nucleus, plastid | 40.11 | 38.97 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 36.94 | 38.67 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 29.55 | 38.62 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 34.56 | 38.53 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 38.26 | 38.26 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 36.41 | 37.7 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 35.36 | 36.81 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 34.83 | 36.77 |
| Os07t0617000-02 | Rice | nucleus | 32.98 | 36.55 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 38.79 | 36.12 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 35.62 | 36.1 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 36.41 | 35.84 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 36.68 | 35.73 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 35.62 | 35.25 |
| KXG36690 | Sorghum | nucleus | 29.55 | 35.0 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 29.82 | 34.14 |
| VIT_05s0077g01860.t01 | Wine grape | nucleus | 23.22 | 33.98 |
| Zm00001d020595_P001 | Maize | nucleus | 36.41 | 33.01 |
| Zm00001d018305_P001 | Maize | nucleus | 24.27 | 32.62 |
| Zm00001d005798_P001 | Maize | nucleus | 35.62 | 31.91 |
| EES13952 | Sorghum | nucleus | 27.18 | 27.76 |
| VIT_07s0031g00710.t01 | Wine grape | nucleus | 13.46 | 27.42 |
| Zm00001d032095_P001 | Maize | nucleus | 27.18 | 27.11 |
| VIT_07s0031g00720.t01 | Wine grape | nucleus | 14.51 | 25.58 |
| Zm00001d047339_P001 | Maize | plastid | 28.23 | 23.73 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 14.78 | 23.63 |
| VIT_17s0000g00200.t01 | Wine grape | nucleus | 15.3 | 23.58 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 14.51 | 22.27 |
| VIT_14s0068g01040.t01 | Wine grape | nucleus | 17.15 | 20.19 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 18.21 | 19.6 |
| Zm00001d045386_P002 | Maize | plastid | 17.41 | 16.18 |
| VIT_18s0072g00260.t01 | Wine grape | nucleus | 18.21 | 14.59 |
Protein Annotations
| EntrezGene:100248027 | wikigene:100248027 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:CCB59248 | ProteinID:CCB59248.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HXP1 | EMBL:FN596494 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100248027 |
| wikigene:LOC100248027 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 |
| SMART:SM00380 | SUPFAM:SSF54171 | TIGR:TC52148 | TIGR:TC52806 | UniParc:UPI0001983EE4 | ArrayExpress:VIT_09s0002g00470 |
| EnsemblPlantsGene:VIT_09s0002g00470 | EnsemblPlants:VIT_09s0002g00470.t01 | RefSeq:XP_002267008 | RefSeq:XP_002267008.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr9:+:355010..357884
Molecular Weight (calculated)
41986.1 Da
IEP (calculated)
4.573
GRAVY (calculated)
-0.865
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDF IPASRCRRVD EDYFPALKKR TSGNHCSKSL WSEAVEDDDD DDFEADFLGF KDDSDDEEDD IKPSAFSAAK PHGYTGIKSV EFNGQAEKSA
101: KRKRKNQYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDAE ARRIRGKKAK VNFPDETPLT APKRTIKANA QKLIPKGSPN SSHSNLNQSF
201: NFMNNSDQEY YSSLMDEKPS TNQYGYPDSF PANGEVGLKS LAPSENGRMY FNSDQGSNSF DCSDLGWGEQ GAKTPEISSV LSATLEGDES QFIEDANPKK
301: KLKSNSQNAV PVEENTPNGL SEDLSAFESQ MKYFQIPYLD GNWEASMDAL LSGDAAQDGG NPMDLWSFDD LPTVVGGVF
101: KRKRKNQYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTA EEAARAYDAE ARRIRGKKAK VNFPDETPLT APKRTIKANA QKLIPKGSPN SSHSNLNQSF
201: NFMNNSDQEY YSSLMDEKPS TNQYGYPDSF PANGEVGLKS LAPSENGRMY FNSDQGSNSF DCSDLGWGEQ GAKTPEISSV LSATLEGDES QFIEDANPKK
301: KLKSNSQNAV PVEENTPNGL SEDLSAFESQ MKYFQIPYLD GNWEASMDAL LSGDAAQDGG NPMDLWSFDD LPTVVGGVF
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.