Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P05800_001 | Banana | nucleus | 57.67 | 68.61 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 41.41 | 58.7 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 43.56 | 57.26 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 36.2 | 49.79 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 22.09 | 46.75 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 25.46 | 45.11 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 53.07 | 45.05 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 51.84 | 44.59 |
| GSMUA_Achr11P... | Banana | nucleus | 26.07 | 42.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.22 | 42.59 |
| GSMUA_Achr10P... | Banana | nucleus | 34.97 | 42.38 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 46.93 | 42.15 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 42.64 | 42.12 |
| KRG97290 | Soybean | nucleus | 37.12 | 40.47 |
| GSMUA_Achr10P... | Banana | nucleus | 34.05 | 38.68 |
| KRH06265 | Soybean | nucleus | 44.79 | 38.22 |
| KRH47694 | Soybean | nucleus | 45.09 | 37.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.64 | 37.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.38 | 36.75 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 15.64 | 36.69 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 18.1 | 29.95 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 18.4 | 25.97 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 15.64 | 25.76 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 17.79 | 24.68 |
| GSMUA_Achr10P... | Banana | nucleus | 17.18 | 24.67 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 17.48 | 23.17 |
| GSMUA_Achr11P... | Banana | nucleus | 17.79 | 22.66 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 17.79 | 21.89 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 17.79 | 19.93 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 16.87 | 19.78 |
| GSMUA_Achr10P... | Banana | nucleus | 17.48 | 19.39 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G23730_001 | EnsemblPlants:GSMUA_Achr8P23730_001 | EnsemblPlants:GSMUA_Achr8T23730_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0TT26 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295ED54 | SEG:seg |
Description
Putative Ethylene-responsive transcription factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G23730_001]
Coordinates
chr8:-:28108265..28111114
Molecular Weight (calculated)
36579.6 Da
IEP (calculated)
5.411
GRAVY (calculated)
-0.844
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDL IPATRSARRV TADYLWPDLK KGGASGAKKK RRSGNRRAVE VTEDDFEADF LEFDYESMDS EVEDEVEDKP LAFASKVTLK SVEFNGPAAR
101: STKRKRKNQY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD TEARRIRGKK AKVNFPDEAP PIVQKRPLKS NVAKAPKLNP SEKLNFSQFT
201: NYLNEPDQDF YSAFDFIDDK GPIKQSINTC SFSGMKPSPP TDGPAINLYS DQGSNSFDCS EYGREGEAKT PEITSILTPT MTESEESAYF EGPQPKKLRN
301: NAGEMDMNGV DLWSFDDLFP ITGSDY
101: STKRKRKNQY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD TEARRIRGKK AKVNFPDEAP PIVQKRPLKS NVAKAPKLNP SEKLNFSQFT
201: NYLNEPDQDF YSAFDFIDDK GPIKQSINTC SFSGMKPSPP TDGPAINLYS DQGSNSFDCS EYGREGEAKT PEITSILTPT MTESEESAYF EGPQPKKLRN
301: NAGEMDMNGV DLWSFDDLFP ITGSDY
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTVGSA
101: YAKKTVESAE QAEKSSKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGTKAKVNFP EEKNPSVVSQ KRPSAKTNNL
201: QKSVAKPNKS VTLVQQPTHL SQQYCNNSFD NSFGDMSFME EKPQMYNNQF GLTNSFDAGG NNGYQYFSSD QGSNSFDCSE FGWSDHGPKT PEISSMLVNN
301: NEASFVEETN AAKKLKPNSD ESDDLMAYLD NALWDTPLEV EAMLGADAGA VTQEEENPVE LWSLDEINFM LEGDF
101: YAKKTVESAE QAEKSSKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGTKAKVNFP EEKNPSVVSQ KRPSAKTNNL
201: QKSVAKPNKS VTLVQQPTHL SQQYCNNSFD NSFGDMSFME EKPQMYNNQF GLTNSFDAGG NNGYQYFSSD QGSNSFDCSE FGWSDHGPKT PEISSMLVNN
301: NEASFVEETN AAKKLKPNSD ESDDLMAYLD NALWDTPLEV EAMLGADAGA VTQEEENPVE LWSLDEINFM LEGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.