Factsheet for GSMUA_Achr2P07300_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10870_001	Banana	nucleus	43.33	60.34
GSMUA_Achr2P21900_001	Banana	nucleus	26.36	56.49
GSMUA_Achr3P05800_001	Banana	nucleus	41.82	50.37
GSMUA_Achr9P18090_001	Banana	nucleus	36.97	49.19
GSMUA_Achr3P10140_001	Banana	nucleus	33.64	48.26
GSMUA_AchrUn_...	Banana	nucleus	54.55	48.13
GSMUA_Achr10P...	Banana	nucleus	36.36	44.61
GSMUA_Achr10P...	Banana	nucleus	38.79	44.6
GSMUA_Achr3P08170_001	Banana	nucleus	24.85	44.57
GSMUA_AchrUn_...	Banana	nucleus	28.79	43.98
GSMUA_Achr11P...	Banana	nucleus	26.36	43.72
GSMUA_Achr8P23730_001	Banana	nucleus	42.12	42.64
GSMUA_Achr5P24060_001	Banana	nucleus	46.06	39.58
GSMUA_Achr7P19800_001	Banana	nucleus	41.82	38.02
Os02t0782700-01	Rice	nucleus	40.91	36.99
EER87998	Sorghum	nucleus	39.7	36.59
GSMUA_Achr7P18930_001	Banana	nucleus	15.15	35.97
Os06t0194000-02	Rice	nucleus	39.39	35.91
Zm00001d045044_P001	Maize	nucleus, plastid	38.79	35.26
TraesCS6B01G126700.1	Wheat	nucleus, plastid	25.15	35.17
GSMUA_AchrUn_...	Banana	nucleus	24.55	34.62
HORVU6Hr1G082880.1	Barley	nucleus	38.48	34.42
TraesCS7D01G158500.1	Wheat	nucleus	36.97	34.37
Zm00001d052087_P001	Maize	nucleus	37.27	34.07
TraesCS7B01G062200.1	Wheat	nucleus	36.36	33.8
TraesCS7A01G158000.1	Wheat	nucleus	36.06	33.71
TraesCSU01G183700.1	Wheat	nucleus	28.79	33.45
EES07642	Sorghum	nucleus	37.27	33.42
TraesCS6D01G324200.1	Wheat	nucleus	39.39	32.66
TraesCS6B01G375400.1	Wheat	nucleus	39.09	32.41
TraesCS6A01G343300.1	Wheat	nucleus	39.09	32.41
HORVU6Hr1G082840.1	Barley	nucleus	30.61	32.37
HORVU6Hr1G017530.1	Barley	nucleus	38.18	32.23
HORVU0Hr1G021820.1	Barley	nucleus	27.88	32.17
HORVU7Hr1G032750.1	Barley	nucleus, plastid	37.58	31.79
TraesCS7D01G416300.1	Wheat	nucleus	31.82	31.72
HORVU6Hr1G083520.2	Barley	nucleus, plastid	30.61	31.27
TraesCS7B01G324400.1	Wheat	nucleus	29.39	31.09
TraesCS7D01G378200.1	Wheat	nucleus	26.06	30.82
TraesCS6D01G084200.1	Wheat	nucleus	35.15	30.61
TraesCS6B01G126600.1	Wheat	nucleus	33.94	30.6
TraesCS6D01G085000.1	Wheat	nucleus	30.0	30.56
HORVU6Hr1G064370.1	Barley	nucleus	26.67	30.34
HORVU6Hr1G076090.2	Barley	nucleus	29.09	30.0
HORVU7Hr1G090440.1	Barley	nucleus	33.94	29.95
TraesCS7B01G283900.1	Wheat	nucleus	25.15	29.75
TraesCS7A01G377400.1	Wheat	nucleus	30.61	29.71
TraesCS6A01G097500.1	Wheat	nucleus	32.73	29.67
TraesCS6A01G097700.1	Wheat	nucleus	32.12	29.28
GSMUA_Achr3P08180_001	Banana	nucleus	16.97	28.43
TraesCS7D01G373700.1	Wheat	nucleus	30.61	28.13
TraesCS6B01G125900.1	Wheat	nucleus	32.42	27.79
TraesCS7B01G278700.1	Wheat	nucleus	32.12	27.68
TraesCS6D01G084900.1	Wheat	nucleus	32.42	27.51
GSMUA_Achr6P02310_001	Banana	nucleus	16.06	26.77
TraesCS6B01G427100.1	Wheat	nucleus	26.06	25.98
GSMUA_Achr6P25680_001	Banana	nucleus	16.67	23.81
GSMUA_Achr6P18020_001	Banana	nucleus	19.09	23.77
GSMUA_Achr10P...	Banana	nucleus	16.06	23.35
GSMUA_Achr8P22500_001	Banana	nucleus	17.27	23.17
GSMUA_Achr3P06960_001	Banana	nucleus	16.06	22.55
Zm00001d018305_P001	Maize	nucleus	18.79	21.99
GSMUA_Achr11P...	Banana	nucleus	16.67	21.48
Zm00001d047339_P001	Maize	plastid	28.48	20.84
GSMUA_Achr10P...	Banana	nucleus	16.36	18.37
GSMUA_Achr6P08140_001	Banana	nucleus	15.45	18.35
GSMUA_Achr2P21430_001	Banana	nucleus, plastid	16.06	18.21
Zm00001d045386_P002	Maize	plastid	16.67	13.48

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G07300_001	EnsemblPlants:GSMUA_Achr2P07300_001	EnsemblPlants:GSMUA_Achr2T07300_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0S5X1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF44	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002959590	SEG:seg

Description

Putative Ethylene-responsive transcription factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G07300_001]

Coordinates

chr2:-:11835193..11837658

Molecular Weight (calculated)

36572.3 Da

IEP (calculated)

4.531

GRAVY (calculated)

-0.704

Length

330 amino acids

Sequence
(BLAST)

001: MCGGAIISEF IPAAASRRVT AENPWPGGRK RWGKQRRVEA EDDFEADFQE FDDESSEDEF DDEEEIDEVG VKCFGFGSKP CFSRERSTTL KSGDFSGSEV
101: QSAKRKRKNQ FRGIRQRPWG KWAAEIRDPH KGVRVWLGTF NSAEEAARAY DAEARRIRGK KAKVNFPRAA SSGSKKIIPK PTALRTHVPN PHLEEELAKP
201: VYLNTLPTKE PSAPGEGMEF HSDEGSNSCG DPDFGLLSVQ VPTADNGLLS LKNLKDNCGV QVSEEETTPV DLSEDLSAFD PYANFMQFPY LEGSSDLSID
301: SLFGGELAQG DLADVNLWSF DELPMEGSLY

Best Arabidopsis Sequence Match ( AT1G53910.1 )
(BLAST)

001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF

Arabidopsis Description

RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.