Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18930_001 | Banana | nucleus | 19.62 | 37.41 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 32.08 | 36.8 |
| GSMUA_Achr10P... | Banana | nucleus | 27.92 | 32.6 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 23.02 | 30.81 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 22.26 | 29.95 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 17.36 | 29.87 |
| KRH64120 | Soybean | nucleus | 30.94 | 29.18 |
| GSMUA_Achr10P... | Banana | nucleus | 31.32 | 28.23 |
| GSMUA_Achr11P... | Banana | nucleus | 26.79 | 27.73 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 36.23 | 27.27 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 24.15 | 27.23 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 18.87 | 27.17 |
| GSMUA_Achr11P... | Banana | nucleus | 20.38 | 27.14 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 32.08 | 27.07 |
| Solyc04g051360.2.1 | Tomato | nucleus | 30.94 | 27.06 |
| KRH53825 | Soybean | nucleus | 32.83 | 27.02 |
| OQU78803 | Sorghum | nucleus | 34.72 | 26.98 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 33.21 | 26.91 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 33.21 | 26.83 |
| Zm00001d053195_P002 | Maize | nucleus | 33.21 | 26.75 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 27.92 | 26.62 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 33.21 | 25.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.75 | 25.46 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 27.55 | 25.09 |
| Os12t0168100-01 | Rice | nucleus | 31.32 | 24.34 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 22.26 | 23.79 |
| KRH43369 | Soybean | nucleus | 26.42 | 23.65 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 21.13 | 23.63 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 20.38 | 23.48 |
| CDY14506 | Canola | nucleus | 34.34 | 23.21 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 21.51 | 23.17 |
| Bra037794.1-P | Field mustard | nucleus | 33.21 | 23.1 |
| Bra024325.1-P | Field mustard | nucleus | 34.34 | 23.04 |
| CDY08853 | Canola | nucleus | 34.34 | 23.04 |
| Bra031903.1-P | Field mustard | nucleus | 32.45 | 22.69 |
| CDY31304 | Canola | nucleus | 32.45 | 22.57 |
| CDY46821 | Canola | nucleus | 32.45 | 22.51 |
| AT5G64750.1 | Thale cress | nucleus | 33.21 | 22.51 |
| Zm00001d023535_P001 | Maize | nucleus | 35.85 | 22.46 |
| CDX81250 | Canola | nucleus | 33.96 | 22.33 |
| PGSC0003DMT400050718 | Potato | nucleus | 33.21 | 22.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.25 | 21.79 |
| KRH59504 | Soybean | nucleus | 28.3 | 21.74 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 20.75 | 20.07 |
| GSMUA_Achr10P... | Banana | nucleus | 21.51 | 19.86 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 23.77 | 19.09 |
| GSMUA_Achr10P... | Banana | nucleus | 18.87 | 18.59 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 21.89 | 17.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.53 | 17.38 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 22.26 | 15.36 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 20.38 | 14.88 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G18020_001 | EnsemblPlants:GSMUA_Achr6P18020_001 | EnsemblPlants:GSMUA_Achr6T18020_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T800 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029689CB | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G18020_001]
Coordinates
chr6:+:12135005..12136361
Molecular Weight (calculated)
28363.0 Da
IEP (calculated)
8.810
GRAVY (calculated)
-0.529
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVMVSTLTR VVAGEDGASL PSLPSSGEQN GGGRQMQGRE SFVHEEVPRF CITFGSSPGG SSSSSASAAG SSTRAVHFCS SQGGRKRFRG VRQRPWGKWA
101: AEIRDPHKAA RVWLGTFDTA ESAARAYDEA ALRFRGNRAK LNFPEDAGVR QAPAAAPSAA PAALLESRPF DAMRDYWEYS RLLQGAEDGR GMPPPALLDE
201: TVSCRANNPA SPLTAAAAAS GHPLSPLLYP PASEQQMDYL QLPPWTESSH YPPSSSQYRH AKTSI
101: AEIRDPHKAA RVWLGTFDTA ESAARAYDEA ALRFRGNRAK LNFPEDAGVR QAPAAAPSAA PAALLESRPF DAMRDYWEYS RLLQGAEDGR GMPPPALLDE
201: TVSCRANNPA SPLTAAAAAS GHPLSPLLYP PASEQQMDYL QLPPWTESSH YPPSSSQYRH AKTSI
001: MSAMVSALTQ VVSARSQTEA EGAHSQTEAE GAHSSSSSAG HKRGWLGIDS APIPSSFARV DSSHNPIEES MSKAFPEEAR EKKRRYRGVR QRPWGKWAAE
101: IRDPHRAARV WLGTFDTAEA AARAYDEAAL RFRGNKAKLN FPEDVRILPP PPPLLRSPAD TVANKAEEDL INYWSYTKLL QSSGQRSFLE RGQEESSNIF
201: EHSPMEQPLP PSSSGPSSSN FPAPSLPNT
101: IRDPHRAARV WLGTFDTAEA AARAYDEAAL RFRGNKAKLN FPEDVRILPP PPPLLRSPAD TVANKAEEDL INYWSYTKLL QSSGQRSFLE RGQEESSNIF
201: EHSPMEQPLP PSSSGPSSSN FPAPSLPNT
Arabidopsis Description
ERF110Ethylene response factor 110 [Source:UniProtKB/TrEMBL;Acc:G8IQH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.