Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053195_P002 | Maize | nucleus | 35.7 | 45.9 |
| Os12t0168100-01 | Rice | nucleus | 32.15 | 39.88 |
| OQU82952 | Sorghum | mitochondrion | 30.02 | 38.6 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 22.46 | 35.85 |
| Zm00001d031673_P001 | Maize | nucleus | 15.6 | 34.02 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 25.06 | 33.76 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 25.77 | 33.33 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 25.53 | 32.93 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 25.53 | 31.67 |
| Zm00001d018158_P001 | Maize | nucleus | 16.78 | 30.08 |
| Zm00001d052167_P001 | Maize | nucleus | 16.08 | 29.57 |
| KRH64120 | Soybean | nucleus | 19.39 | 29.18 |
| Solyc04g051360.2.1 | Tomato | nucleus | 20.8 | 29.04 |
| Zm00001d016616_P001 | Maize | nucleus | 17.26 | 28.63 |
| Zm00001d037941_P001 | Maize | nucleus | 13.0 | 28.5 |
| Zm00001d031796_P001 | Maize | nucleus | 17.97 | 28.25 |
| Zm00001d009103_P001 | Maize | nucleus | 15.13 | 27.83 |
| Zm00001d005892_P001 | Maize | nucleus | 17.26 | 27.76 |
| Zm00001d040651_P001 | Maize | nucleus | 14.89 | 26.58 |
| KRH53825 | Soybean | nucleus | 19.86 | 26.09 |
| KRH43369 | Soybean | nucleus | 18.2 | 26.01 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 21.04 | 25.28 |
| Zm00001d021089_P001 | Maize | nucleus | 13.48 | 25.11 |
| PGSC0003DMT400050718 | Potato | nucleus | 23.17 | 24.75 |
| Bra037794.1-P | Field mustard | nucleus | 21.51 | 23.88 |
| KRH59504 | Soybean | nucleus | 18.91 | 23.19 |
| AT5G64750.1 | Thale cress | nucleus | 21.28 | 23.02 |
| Bra031903.1-P | Field mustard | nucleus | 20.57 | 22.96 |
| CDY31304 | Canola | nucleus | 20.57 | 22.83 |
| CDY46821 | Canola | nucleus | 20.57 | 22.77 |
| CDY14506 | Canola | nucleus | 20.33 | 21.94 |
| Bra024325.1-P | Field mustard | nucleus | 20.33 | 21.77 |
| CDX81250 | Canola | nucleus | 20.57 | 21.59 |
| CDY08853 | Canola | nucleus | 20.09 | 21.52 |
| Zm00001d027925_P001 | Maize | nucleus | 16.08 | 20.0 |
| Zm00001d007033_P001 | Maize | plastid | 12.53 | 18.66 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 14.18 | 16.53 |
| Zm00001d052087_P001 | Maize | nucleus | 13.71 | 16.07 |
| Zm00001d020595_P001 | Maize | nucleus | 15.13 | 15.31 |
| Zm00001d005798_P001 | Maize | nucleus | 15.13 | 15.13 |
| Zm00001d032095_P001 | Maize | nucleus | 11.11 | 12.37 |
| Zm00001d047339_P001 | Maize | plastid | 12.29 | 11.53 |
| Zm00001d045386_P002 | Maize | plastid | 5.2 | 5.39 |
| Zm00001d018305_P001 | Maize | nucleus | 3.07 | 4.61 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A1D6ITZ0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:AQK39512.1 |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00084493BE | EnsemblPlantsGene:Zm00001d023535 | EnsemblPlants:Zm00001d023535_P001 | EnsemblPlants:Zm00001d023535_T001 |
| SEG:seg | : | : | : | : | : |
Description
AP2-EREBP-transcription factor 28Putative AP2/EREBP transcription factor superfamily protein
Coordinates
chr10:-:9153462..9156390
Molecular Weight (calculated)
43070.7 Da
IEP (calculated)
9.855
GRAVY (calculated)
-0.439
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MCHAAVANSG EQRRRLLAAD ADSDGEGGGG GGGGGGAGRG EPAAVMATAA APWQESGSRQ AREMSAMVAA LARVVAGSAA PPAKGPGGAG LLAQAQAQDA
101: SMAEACWPYP YAELQPHVAE PSPSRFVLHG HSATQLSEEY WPAAAAAAAS SSQHRAASAG ADDDELPSPP SAGGVSSSST SASNRAAARR RYRGVRQRPW
201: GKWAAEIRDP HKAARVWLGT FDSAEAAARA YDGAALRFRG SRAKLNFPES ATLASAPRGP TTATAQQRQH PSLAPAARPA RPEALLESQA LPAAGTDPYS
301: EYARFLQSGS GGGPSASSGV LPTTSVSATL LPAPPPSTAA SAATAYGFGA EGEALGGYGY LSPPQSRAGS GTPPAAWASV YSSSYPPWRQ KPQKELNRPN
401: IKRQTISNTI FQVPASISTR NAP
101: SMAEACWPYP YAELQPHVAE PSPSRFVLHG HSATQLSEEY WPAAAAAAAS SSQHRAASAG ADDDELPSPP SAGGVSSSST SASNRAAARR RYRGVRQRPW
201: GKWAAEIRDP HKAARVWLGT FDSAEAAARA YDGAALRFRG SRAKLNFPES ATLASAPRGP TTATAQQRQH PSLAPAARPA RPEALLESQA LPAAGTDPYS
301: EYARFLQSGS GGGPSASSGV LPTTSVSATL LPAPPPSTAA SAATAYGFGA EGEALGGYGY LSPPQSRAGS GTPPAAWASV YSSSYPPWRQ KPQKELNRPN
401: IKRQTISNTI FQVPASISTR NAP
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.