Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d047935_P003 | |
| Zm00001d049956_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53910.1 | Zm00001d047935_P003 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | Zm00001d049956_P002 | AT2G44040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00666 | Sorghum | nucleus | 84.81 | 88.55 |
| Zm00001d009103_P001 | Maize | nucleus | 83.12 | 85.65 |
| Os01t0313300-01 | Rice | nucleus | 64.56 | 73.91 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 60.34 | 72.22 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 60.34 | 70.1 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 61.18 | 69.05 |
| Zm00001d007033_P001 | Maize | plastid | 69.62 | 58.1 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 60.76 | 48.16 |
| Zm00001d037941_P001 | Maize | nucleus | 24.89 | 30.57 |
| Zm00001d031673_P001 | Maize | nucleus | 21.94 | 26.8 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 38.4 | 25.07 |
| Zm00001d021089_P001 | Maize | nucleus | 23.63 | 24.67 |
| Bra021543.1-P | Field mustard | nucleus | 37.55 | 24.38 |
| Zm00001d027925_P001 | Maize | nucleus | 34.6 | 24.12 |
| CDY02492 | Canola | nucleus | 30.8 | 23.86 |
| Bra030919.1-P | Field mustard | nucleus | 30.8 | 23.86 |
| CDY25681 | Canola | nucleus | 30.8 | 23.78 |
| Zm00001d018158_P001 | Maize | nucleus | 23.63 | 23.73 |
| CDX75756 | Canola | nucleus | 34.6 | 23.56 |
| Zm00001d052087_P001 | Maize | nucleus | 35.87 | 23.55 |
| Bra027355.1-P | Field mustard | nucleus | 37.55 | 23.48 |
| CDX98435 | Canola | nucleus | 37.55 | 23.48 |
| CDY65334 | Canola | nucleus | 37.55 | 23.24 |
| Bra001541.1-P | Field mustard | nucleus | 34.18 | 23.01 |
| CDX82492 | Canola | nucleus | 34.18 | 23.01 |
| AT3G14230.1 | Thale cress | nucleus | 36.71 | 22.96 |
| CDY39107 | Canola | nucleus | 37.55 | 22.82 |
| Zm00001d005892_P001 | Maize | nucleus | 24.89 | 22.43 |
| AT1G53910.1 | Thale cress | nucleus | 33.76 | 22.35 |
| Zm00001d052167_P001 | Maize | nucleus | 21.52 | 22.17 |
| Zm00001d031796_P001 | Maize | nucleus | 24.89 | 21.93 |
| CDX97559 | Canola | nucleus | 37.55 | 20.84 |
| Zm00001d020595_P001 | Maize | nucleus | 36.71 | 20.81 |
| Zm00001d016616_P001 | Maize | nucleus | 21.94 | 20.39 |
| Zm00001d053195_P002 | Maize | nucleus | 27.43 | 19.76 |
| Zm00001d032095_P001 | Maize | nucleus | 31.65 | 19.74 |
| Zm00001d005798_P001 | Maize | nucleus | 35.02 | 19.62 |
| Zm00001d023535_P001 | Maize | nucleus | 26.58 | 14.89 |
| Zm00001d047339_P001 | Maize | plastid | 28.27 | 14.86 |
| Zm00001d018305_P001 | Maize | nucleus | 13.08 | 10.99 |
| Zm00001d045386_P002 | Maize | plastid | 13.08 | 7.6 |
Protein Annotations
| EntrezGene:100193143 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A1D6MRZ1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONM31729.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004DE9475 | EnsemblPlantsGene:Zm00001d040651 |
| EnsemblPlants:Zm00001d040651_P001 | EnsemblPlants:Zm00001d040651_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 193Ethylene-responsive transcription factor RAP2-2
Coordinates
chr3:+:56282555..56283595
Molecular Weight (calculated)
25481.8 Da
IEP (calculated)
8.370
GRAVY (calculated)
-0.413
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIFDY IPARRRVSAA DFWPDSEADA EDSDSHAPDP ERAPLPTVPS RAVPRPRGKA KRGRKNQYRG IRQRPWGKWA AEIRDPVKGV RVWLGTYPTA
101: EAAARAYDRA ARRIRGAKAK VNFPNDASSS SVTAPTAASG VAAQAPAVFL PAPKVEARAQ VSDEVKELSE ELMAYENYMN FLGVPYMEGG NAAVSATTAA
201: AAAAAVPEEA QVPAPAPAGL WSFEDYYYPP SLSLFTE
101: EAAARAYDRA ARRIRGAKAK VNFPNDASSS SVTAPTAASG VAAQAPAVFL PAPKVEARAQ VSDEVKELSE ELMAYENYMN FLGVPYMEGG NAAVSATTAA
201: AAAAAVPEEA QVPAPAPAGL WSFEDYYYPP SLSLFTE
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.