Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d047935_P003 | |
| Zm00001d049956_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53910.1 | Zm00001d047935_P003 | AT2G44040.1 | 21798944 |
| AT1G53910.1 | Zm00001d049956_P002 | AT2G44040.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009103_P001 | Maize | nucleus | 66.55 | 82.17 |
| EES00666 | Sorghum | nucleus | 58.8 | 73.57 |
| Zm00001d040651_P001 | Maize | nucleus | 58.1 | 69.62 |
| Os01t0313300-01 | Rice | nucleus | 45.77 | 62.8 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 41.55 | 59.6 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 42.96 | 58.1 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 41.55 | 57.84 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 45.77 | 43.48 |
| Zm00001d037941_P001 | Maize | nucleus | 19.37 | 28.5 |
| Zm00001d031673_P001 | Maize | nucleus | 17.25 | 25.26 |
| Zm00001d021089_P001 | Maize | nucleus | 18.66 | 23.35 |
| Zm00001d027925_P001 | Maize | nucleus | 24.65 | 20.59 |
| Zm00001d018158_P001 | Maize | nucleus | 16.9 | 20.34 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 25.7 | 20.11 |
| Zm00001d052087_P001 | Maize | nucleus | 25.0 | 19.67 |
| Zm00001d016616_P001 | Maize | nucleus | 17.25 | 19.22 |
| Bra021543.1-P | Field mustard | nucleus | 24.3 | 18.9 |
| Bra027355.1-P | Field mustard | nucleus | 25.0 | 18.73 |
| CDX98435 | Canola | nucleus | 24.65 | 18.47 |
| CDX75756 | Canola | nucleus | 22.54 | 18.39 |
| Zm00001d052167_P001 | Maize | nucleus | 14.79 | 18.26 |
| AT3G14230.1 | Thale cress | nucleus | 24.3 | 18.21 |
| Bra001541.1-P | Field mustard | nucleus | 22.54 | 18.18 |
| CDX82492 | Canola | nucleus | 22.54 | 18.18 |
| CDY65334 | Canola | nucleus | 24.3 | 18.02 |
| Zm00001d032095_P001 | Maize | nucleus | 23.94 | 17.89 |
| Zm00001d005892_P001 | Maize | nucleus | 16.55 | 17.87 |
| Zm00001d031796_P001 | Maize | nucleus | 16.9 | 17.84 |
| CDY39107 | Canola | nucleus | 24.3 | 17.69 |
| CDY25681 | Canola | nucleus | 18.31 | 16.94 |
| Bra030919.1-P | Field mustard | nucleus | 17.96 | 16.67 |
| CDY02492 | Canola | nucleus | 17.96 | 16.67 |
| CDX97559 | Canola | nucleus | 25.0 | 16.63 |
| AT1G53910.1 | Thale cress | nucleus | 20.77 | 16.48 |
| Zm00001d020595_P001 | Maize | nucleus | 23.59 | 16.03 |
| Zm00001d053195_P002 | Maize | nucleus | 17.96 | 15.5 |
| Zm00001d005798_P001 | Maize | nucleus | 22.54 | 15.13 |
| Zm00001d047339_P001 | Maize | plastid | 20.42 | 12.86 |
| Zm00001d023535_P001 | Maize | nucleus | 18.66 | 12.53 |
| Zm00001d018305_P001 | Maize | nucleus | 8.45 | 8.51 |
| Zm00001d045386_P002 | Maize | plastid | 8.8 | 6.13 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A060D789 | ProteinID:AIB05199.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONM25589.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00022100BE | EnsemblPlantsGene:Zm00001d007033 |
| EnsemblPlants:Zm00001d007033_P001 | EnsemblPlants:Zm00001d007033_T001 | SEG:seg | : | : | : |
Description
AP2-EREBP-transcription factor 210Ethylene-responsive transcription factor RAP2-2
Coordinates
chr2:+:220493755..220494609
Molecular Weight (calculated)
30656.8 Da
IEP (calculated)
9.051
GRAVY (calculated)
-0.448
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRSHSLTST PSSLFSSRNP YAAAQSSSTT SRHGAGCRLP TADFWPGFEA DGEDIHASHS SDPQRDKPCF RLALLSRRQH AIQAASCKRS MVSRRAADCS
101: HAAPCAKVKP GRCKIQYRGI RQRPWGKWAA KICDPVKGVR VWLGTYPTVE AAARAYDRAA RRIRGAKAKV NFHSDTSSCV TVPTTASRST AAAAAQAPAV
201: LPPPKVEAQT ELSDEVKELS EELMAYENYT NFLGIPYMEG GTTAASATTA AASAAAEESQ VPAPAGLWSF EDYYYPSSQS LFTE
101: HAAPCAKVKP GRCKIQYRGI RQRPWGKWAA KICDPVKGVR VWLGTYPTVE AAARAYDRAA RRIRGAKAKV NFHSDTSSCV TVPTTASRST AAAAAQAPAV
201: LPPPKVEAQT ELSDEVKELS EELMAYENYT NFLGIPYMEG GTTAASATTA AASAAAEESQ VPAPAGLWSF EDYYYPSSQS LFTE
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.