Factsheet for Zm00001d016616_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85019	Sorghum	nucleus	51.37	44.86
KRH06816	Soybean	nucleus	35.29	34.62
Zm00001d031673_P001	Maize	nucleus	23.92	31.44
Zm00001d037941_P001	Maize	nucleus	19.61	25.91
KRG94719	Soybean	nucleus	34.51	25.81
VIT_14s0068g01040.t01	Wine grape	nucleus	32.55	25.78
Zm00001d021089_P001	Maize	nucleus	22.75	25.55
Zm00001d052167_P001	Maize	nucleus	22.75	25.22
Zm00001d018158_P001	Maize	nucleus	21.96	23.73
Zm00001d009103_P001	Maize	nucleus	21.18	23.48
Zm00001d005892_P001	Maize	nucleus	23.53	22.81
Zm00001d040651_P001	Maize	nucleus	20.39	21.94
Zm00001d031796_P001	Maize	nucleus	22.35	21.19
Zm00001d053195_P002	Maize	nucleus	27.06	20.97
Zm00001d023535_P001	Maize	nucleus	28.63	17.26
Zm00001d007033_P001	Maize	plastid	19.22	17.25
Zm00001d027925_P001	Maize	nucleus	20.78	15.59
Zm00001d045044_P001	Maize	nucleus, plastid	19.61	13.77
Zm00001d052087_P001	Maize	nucleus	19.22	13.57
Zm00001d020595_P001	Maize	nucleus	19.61	11.96
Zm00001d005798_P001	Maize	nucleus	19.61	11.82
Zm00001d032095_P001	Maize	nucleus	17.25	11.58
Zm00001d047339_P001	Maize	plastid	18.82	10.64
Zm00001d045386_P002	Maize	plastid	6.27	3.92
Zm00001d018305_P001	Maize	nucleus	3.14	2.84

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A1D6H9B5	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQK71304.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF73
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0008445737	EnsemblPlantsGene:Zm00001d016616	EnsemblPlants:Zm00001d016616_P001	EnsemblPlants:Zm00001d016616_T001
SEG:seg	:	:	:	:	:

Description

AP2-EREBP-transcription factor 129Ethylene-responsive transcription factor ERF115

Coordinates

chr5:+:170223307..170225790

Molecular Weight (calculated)

26491.0 Da

IEP (calculated)

7.766

GRAVY (calculated)

-0.320

Length

255 amino acids

Sequence
(BLAST)

001: MAYYDDVGTH SASSSLQPGD SAAAAVPVAT ESPHQRLPLE AGSAGCSSAV GQAVEVQEDA GTLTTTMRHY RGVRRRPWGK WAAEIRDPAK AARVWLGTFD
101: TAEAAAAAYD RAALQFKGAK AKLNFPERVR GRTGQGAFLV SPGIPQPPPV SAPLLPPSPV PFPDLMRYAQ LLHSGNVAAA SASTAHDLAP SSQQSPVQIL
201: DFSTRRLLLR GSPPATFGRP SMASSTAASS TSMPVPHVED KDSGAGEEGG TAPPD

Best Arabidopsis Sequence Match ( AT5G13330.1 )
(BLAST)

001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE

Arabidopsis Description

ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.