Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016616_P001 | Maize | nucleus | 44.86 | 51.37 |
| KRH06816 | Soybean | nucleus | 24.66 | 27.69 |
| EER97023 | Sorghum | nucleus | 21.23 | 27.31 |
| EES18078 | Sorghum | nucleus | 17.81 | 26.13 |
| KXG31168 | Sorghum | nucleus | 21.23 | 24.9 |
| EER96855 | Sorghum | mitochondrion, nucleus | 23.63 | 23.47 |
| VIT_14s0068g01040.t01 | Wine grape | nucleus | 24.32 | 22.05 |
| KRG94719 | Soybean | nucleus | 25.68 | 21.99 |
| OQU82952 | Sorghum | mitochondrion | 24.66 | 21.88 |
| EES00666 | Sorghum | nucleus | 16.78 | 21.59 |
| OQU80635 | Sorghum | nucleus | 21.23 | 21.23 |
| OQU80805 | Sorghum | nucleus | 21.58 | 20.93 |
| OQU78803 | Sorghum | nucleus | 20.21 | 17.3 |
| OQU81440 | Sorghum | nucleus | 28.08 | 16.53 |
| KXG36690 | Sorghum | nucleus | 16.44 | 15.0 |
| KXG40036 | Sorghum | nucleus | 15.75 | 13.73 |
| EER87998 | Sorghum | nucleus | 16.44 | 13.41 |
| KXG35689 | Sorghum | nucleus, plastid | 17.12 | 12.82 |
| EES07642 | Sorghum | nucleus | 15.75 | 12.5 |
| EES13952 | Sorghum | nucleus | 15.07 | 11.86 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A1Z5RN70 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EnsemblPlants:OQU85019 | ProteinID:OQU85019 | ProteinID:OQU85019.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 | SMART:SM00380 | EnsemblPlantsGene:SORBI_3004G158901 | SUPFAM:SSF54171 | UniParc:UPI000B8BAC2F |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:50514347..50516535
Molecular Weight (calculated)
31751.7 Da
IEP (calculated)
11.583
GRAVY (calculated)
-0.848
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDHRRHGSK RPLPDQSDGG EEAAAHQSSA SQSLASSSSA PSSSQERHFQ RRQQQIDLGW GGGGIGHHHR YLAQAAAPAP AWYHEQAEQQ GVYYSSSTMA
101: YYDVGTRSSA SSSLQPGDMD ATAVPPVATG GSPHHRVPLE AGAAAGGSSA AGQAAVEVEE GTSTTTMRHY RGVRRRPWGK WAAEIRDPAK AARVWLGTFD
201: TAEAAAAAYD DAALRFKGAK AKLNFPERVR GRTGQGAFLV SPAATSWPAA PVISRRRRRR HRHRRRRCRF WTSRRGNSSG PHRLQRSADR RC
101: YYDVGTRSSA SSSLQPGDMD ATAVPPVATG GSPHHRVPLE AGAAAGGSSA AGQAAVEVEE GTSTTTMRHY RGVRRRPWGK WAAEIRDPAK AARVWLGTFD
201: TAEAAAAAYD DAALRFKGAK AKLNFPERVR GRTGQGAFLV SPAATSWPAA PVISRRRRRR HRHRRRRCRF WTSRRGNSSG PHRLQRSADR RC
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.