CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031673_P001	Maize	nucleus	33.89	52.58
TraesCS7D01G265000.1	Wheat	plastid	36.88	49.55
TraesCS7A01G264100.1	Wheat	plastid	36.88	48.9
TraesCS7B01G162100.1	Wheat	plastid	36.21	48.66
EER97023	Sorghum	nucleus	22.26	29.52
EES18078	Sorghum	nucleus	17.61	26.63
KRH06816	Soybean	nucleus	21.93	25.38
KXG31168	Sorghum	nucleus	20.27	24.5
EES00666	Sorghum	nucleus	18.27	24.23
OQU78803	Sorghum	nucleus	24.58	21.7
OQU85019	Sorghum	nucleus	20.93	21.58
OQU82952	Sorghum	mitochondrion	23.26	21.28
OQU80635	Sorghum	nucleus	19.93	20.55
VIT_14s0068g01040.t01	Wine grape	nucleus	21.93	20.5
EER96855	Sorghum	mitochondrion, nucleus	19.93	20.41
KRG94719	Soybean	nucleus	21.93	19.35
KXG40036	Sorghum	nucleus	17.61	15.82
KXG36690	Sorghum	nucleus	16.61	15.62
OQU81440	Sorghum	nucleus	24.92	15.12
EER87998	Sorghum	nucleus	17.61	14.8
EES07642	Sorghum	nucleus	17.61	14.4
KXG35689	Sorghum	nucleus, plastid	17.28	13.33
EES13952	Sorghum	nucleus	16.28	13.21

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A1Z5RBI8	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
EnsemblPlants:OQU80805	ProteinID:OQU80805	ProteinID:OQU80805.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF73	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G188701	SUPFAM:SSF54171	UniParc:UPI000B8BAA39
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:62143339..62145971

Molecular Weight (calculated)

32152.3 Da

IEP (calculated)

10.170

GRAVY (calculated)

-0.626

Length

301 amino acids

Sequence
(BLAST)

001: MANEVRDHHT MGAPERGYGT SDRPDTYVKN QRTIEEYSYG RCLARAAAAH ASVDRPREIS AAAAAAHQQG ARRDEAQAAA GGSGGVWWRP PLRAEDEHAV
101: IVAALAHVVG EGRQAQQQQP PPVLGHGQQV MHRTAPAVEP PQQQRLRYRG VRQRPWGKWA AEIRDPVKAA RVWLGTFDTA EDAARAYDAA ALRFKGAKAK
201: LNFPFQQPAT TATASTSATL APTPRQGTRH AAAAPAGAHQ QEFPDLSRYA HILQSGGDLD LQAFSGAGGL TPGRSSTTTA SASSSSPPAP SVDWFPWRGP
301: A

Best Arabidopsis Sequence Match ( AT5G13330.1 )
(BLAST)

001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE

Arabidopsis Description

ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.