CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005892_P001	Maize	nucleus	69.73	77.95
TraesCS1A01G370700.1	Wheat	nucleus	45.92	50.94
TraesCS1D01G376800.1	Wheat	nucleus	45.92	50.56
TraesCS1B01G389900.1	Wheat	nucleus	45.58	50.19
TraesCS1D01G376600.1	Wheat	nucleus	42.18	46.79
TraesCS1B01G389700.1	Wheat	nucleus	39.8	46.61
HORVU1Hr1G082310.1	Barley	nucleus	41.84	46.59
TraesCS1D01G376700.1	Wheat	nucleus	41.84	46.24
TraesCS1A01G370600.1	Wheat	nucleus	40.14	46.09
TraesCS1B01G389800.1	Wheat	nucleus	40.48	45.95
PGSC0003DMT400021311	Potato	nucleus	24.15	45.81
OQU80635	Sorghum	nucleus	45.24	45.55
TraesCS1A01G370400.1	Wheat	nucleus	39.46	44.62
TraesCS1D01G376500.1	Wheat	nucleus	39.46	42.8
PGSC0003DMT400021312	Potato	nucleus, plastid	21.77	41.56
Bra034624.1-P	Field mustard	nucleus	22.45	39.05
KXG31168	Sorghum	nucleus	32.31	38.15
KRH50274	Soybean	nucleus	29.59	37.83
Solyc10g050970.1.1	Tomato	nucleus	28.23	37.22
VIT_03s0063g00460.t01	Wine grape	nucleus	30.95	36.84
CDY46253	Canola	nucleus	32.65	36.78
KRH71142	Soybean	nucleus	26.87	36.74
CDX76278	Canola	nucleus	32.31	35.85
CDX72481	Canola	nucleus	31.29	35.66
CDY45310	Canola	nucleus	30.95	34.87
Bra011529.1-P	Field mustard	nucleus	30.27	33.97
CDX75430	Canola	nucleus	30.27	33.97
AT4G34410.1	Thale cress	nucleus	30.95	33.96
CDX69054	Canola	nucleus	30.27	33.71
Bra017656.1-P	Field mustard	nucleus	30.61	33.33
Solyc01g108240.2.1	Tomato	nucleus	29.93	29.83
CDX69056	Canola	nucleus	20.41	29.41
PGSC0003DMT400066343	Potato	nucleus	29.25	29.15
EES00666	Sorghum	nucleus	20.75	26.87
EES18078	Sorghum	nucleus	18.03	26.63
EER97023	Sorghum	nucleus	20.07	25.99
OQU85019	Sorghum	nucleus	23.47	23.63
OQU82952	Sorghum	mitochondrion	25.17	22.49
OQU78803	Sorghum	nucleus	23.13	19.94
OQU80805	Sorghum	nucleus	20.41	19.93
KXG36690	Sorghum	nucleus	20.41	18.75
KXG40036	Sorghum	nucleus	19.73	17.31
EER87998	Sorghum	nucleus	20.41	16.76
KXG35689	Sorghum	nucleus, plastid	21.77	16.41
EES07642	Sorghum	nucleus	20.07	16.03
EES13952	Sorghum	nucleus	17.01	13.48
OQU81440	Sorghum	nucleus	21.77	12.9

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8083217	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5X2B4
InterPro:DNA-bd_dom_sf	EnsemblPlants:EER96855	ProteinID:EER96855	ProteinID:EER96855.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF62	SMART:SM00380	EnsemblPlantsGene:SORBI_3002G225700	SUPFAM:SSF54171
UniParc:UPI0001A83611	RefSeq:XP_002460334.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:61785485..61786369

Molecular Weight (calculated)

31024.4 Da

IEP (calculated)

5.664

GRAVY (calculated)

-0.337

Length

294 amino acids

Sequence
(BLAST)

001: MTKKLISAMA GKQGFKEQQF NDQRRQQASI QGDDIAKSLV GFGGGGGRLI SHEQEDAIIV AALRHVVSGY STPPPEVVTV AGGEPCGVCG IDGCLGCDFF
101: GAAPELTQQE AVNFGTGQMV ATAAAAAAGG EHGQRTRRRR KKNMYRGVRQ RPWGKWAAEI RDPRRAARVW LGTFDTAEEA ARAYDCAAIE FRGARAKLNF
201: PGHEALLPFQ GHGHGGDACA TAAANAETQT TPMLMTPSPC SADAAAAAPG DWQLGGGVDG GEGDEVWEGL LQDLMKQDEA DLWFLPFSGA ASSF

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.