CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018158_P001	Maize	nucleus	73.49	77.54
Zm00001d052167_P001	Maize	nucleus	69.08	74.78
Os02t0764700-01	Rice	nucleus	63.05	64.88
TraesCS6B01G350400.1	Wheat	nucleus	65.46	64.43
TraesCS6A01G319600.1	Wheat	nucleus	63.45	63.97
TraesCS6D01G299000.1	Wheat	nucleus	44.58	59.04
TraesCS6B01G350000.1	Wheat	nucleus	44.18	58.51
TraesCS6B01G350100.1	Wheat	nucleus	43.78	58.29
HORVU6Hr1G078520.1	Barley	nucleus	43.37	57.75
TraesCS6A01G319500.1	Wheat	nucleus	43.37	57.45
TraesCS6D01G298700.1	Wheat	nucleus	42.97	57.22
TraesCS6D01G299100.1	Wheat	nucleus, plastid	65.46	54.88
TraesCS6D01G298800.1	Wheat	nucleus	44.98	50.91
HORVU6Hr1G078510.5	Barley	nucleus	50.6	49.03
OQU80635	Sorghum	nucleus	38.96	33.22
EER96855	Sorghum	mitochondrion, nucleus	38.15	32.31
EES18078	Sorghum	nucleus	22.09	27.64
EER97023	Sorghum	nucleus	23.69	25.99
EES00666	Sorghum	nucleus	22.09	24.23
OQU85019	Sorghum	nucleus	24.9	21.23
OQU82952	Sorghum	mitochondrion	27.31	20.67
OQU80805	Sorghum	nucleus	24.5	20.27
OQU78803	Sorghum	nucleus	24.9	18.18
KXG36690	Sorghum	nucleus	22.49	17.5
KXG40036	Sorghum	nucleus	22.09	16.42
EES07642	Sorghum	nucleus	22.49	15.22
EER87998	Sorghum	nucleus	20.48	14.25
KXG35689	Sorghum	nucleus, plastid	21.69	13.85
EES13952	Sorghum	nucleus	20.08	13.48
OQU81440	Sorghum	nucleus	23.29	11.69

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A194YSF1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
EnsemblPlants:KXG31168	ProteinID:KXG31168	ProteinID:KXG31168.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF80	SMART:SM00380	EnsemblPlantsGene:SORBI_3004G308900	SUPFAM:SSF54171	UniParc:UPI0007F214BC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:64631338..64633492

Molecular Weight (calculated)

25938.4 Da

IEP (calculated)

8.390

GRAVY (calculated)

-0.315

Length

249 amino acids

Sequence
(BLAST)

001: MAPRLERGGF QLPNTEQENS LFLGALISVV SGDAAAPAAL LPAPAPASAA CARCGVDGCH GSGCELVAGS SSDSDGAECS AASASRASVG GGGGVGKRRG
101: RGRRVSSYRG VRRRPWGKWA AEIRDPRRAV RKWLGTFDTA EDAARAYDVA AVEFRGQRAK LNFPADAAAV AAPALAPSWA GAAVQPHHRP LPDHQSLREN
201: CGSNAASPVH VAQAPTTQQG IRTVAKEQDI WDGLNEIVMM DDGSFWSMP

Best Arabidopsis Sequence Match ( AT2G47520.1 )
(BLAST)

001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N

Arabidopsis Description

ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.