Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G299000.1 | Wheat | nucleus | 62.73 | 73.4 |
| TraesCS6D01G298700.1 | Wheat | nucleus | 60.0 | 70.59 |
| HORVU6Hr1G078510.5 | Barley | nucleus | 70.45 | 60.31 |
| TraesCS6D01G299100.1 | Wheat | nucleus, plastid | 66.82 | 49.49 |
| Os02t0764700-01 | Rice | nucleus | 52.27 | 47.52 |
| KXG31168 | Sorghum | nucleus | 50.91 | 44.98 |
| Zm00001d052167_P001 | Maize | nucleus | 46.82 | 44.78 |
| Zm00001d018158_P001 | Maize | nucleus | 46.36 | 43.22 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 38.64 | 34.55 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 36.82 | 30.57 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 36.36 | 29.96 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 35.45 | 29.32 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 33.64 | 27.31 |
| TraesCS7D01G265000.1 | Wheat | plastid | 23.18 | 22.77 |
| TraesCS1D01G230900.1 | Wheat | nucleus | 18.64 | 22.28 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 18.64 | 20.71 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 29.55 | 19.88 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 21.36 | 18.58 |
| TraesCS4D01G298400.1 | Wheat | nucleus | 19.55 | 13.65 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 22.27 | 13.65 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 19.55 | 13.27 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 22.73 | 13.12 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 23.64 | 13.07 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 16.36 | 12.9 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 19.09 | 12.69 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 21.36 | 12.4 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 20.0 | 12.39 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 21.36 | 12.08 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF80 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS6D01G298800 | EnsemblPlants:TraesCS6D01G298800.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:+:409518900..409519814
Molecular Weight (calculated)
23365.3 Da
IEP (calculated)
8.512
GRAVY (calculated)
-0.343
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPRLERGGG GFQLPNAEQE NSLFLRALIS VVSADTDTVV PTLHLEPSTP PFAATPAVGM RAAAAGCARC GVGVDGCLGC DFAAEAMAGS SSEGEGYSAA
101: SFVKDGGVGK ITRRRRGRKF RGVRRRPWGT WAAELRDSHR AVHKWLGTFD TAVEAARAYD AAALEFHGHH ARLNFPTTDA PSWASTSTSG SSTTLPHQQH
201: LPESIHENCR SKASSSAYMP
101: SFVKDGGVGK ITRRRRGRKF RGVRRRPWGT WAAELRDSHR AVHKWLGTFD TAVEAARAYD AAALEFHGHH ARLNFPTTDA PSWASTSTSG SSTTLPHQQH
201: LPESIHENCR SKASSSAYMP
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.