Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G243200.1 | Wheat | nucleus | 92.39 | 91.89 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 88.59 | 90.56 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 74.46 | 73.66 |
| Zm00001d037941_P001 | Maize | nucleus | 68.48 | 65.28 |
| EES18078 | Sorghum | nucleus | 67.93 | 62.81 |
| Os05t0361700-01 | Rice | nucleus | 66.85 | 62.12 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 56.52 | 52.79 |
| AT2G47520.1 | Thale cress | nucleus | 27.72 | 29.82 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 30.43 | 28.28 |
| CDY51428 | Canola | nucleus | 28.8 | 27.04 |
| CDY27480 | Canola | nucleus | 28.26 | 26.94 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 34.78 | 26.02 |
| Bra021401.1-P | Field mustard | nucleus | 28.8 | 24.88 |
| KRH12100 | Soybean | nucleus | 28.26 | 23.32 |
| TraesCS6D01G298700.1 | Wheat | nucleus | 22.83 | 22.46 |
| TraesCS6D01G299000.1 | Wheat | nucleus | 22.83 | 22.34 |
| KRH37061 | Soybean | nucleus | 27.17 | 21.1 |
| VIT_05s0077g01860.t01 | Wine grape | nucleus | 29.35 | 20.85 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 27.72 | 20.73 |
| TraesCS7D01G265000.1 | Wheat | plastid | 25.0 | 20.54 |
| Solyc01g065980.2.1 | Tomato | nucleus | 28.26 | 20.47 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 29.35 | 19.93 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 27.17 | 19.76 |
| PGSC0003DMT400043311 | Potato | nucleus | 28.26 | 19.7 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 28.26 | 19.48 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 27.72 | 19.25 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 27.17 | 18.8 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 33.15 | 18.65 |
| TraesCS6D01G298800.1 | Wheat | nucleus | 22.28 | 18.64 |
| TraesCS6D01G299100.1 | Wheat | nucleus, plastid | 27.72 | 17.17 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 31.52 | 16.34 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 27.72 | 15.74 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 23.37 | 15.41 |
| TraesCS4D01G298400.1 | Wheat | nucleus | 25.54 | 14.92 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 30.43 | 14.7 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 28.26 | 13.72 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 23.37 | 12.99 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 27.17 | 12.56 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 24.46 | 12.53 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 25.54 | 12.08 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF70 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS1D01G230900 | EnsemblPlants:TraesCS1D01G230900.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:319429516..319430253
Molecular Weight (calculated)
19322.7 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.419
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAVIADF VPAGARRPDG SSTDVPGSSL TVTGEEVTEK PPAPGRKTAY RGIRRRPWGR WAAEIRDPRK GARVWLGTYA TAEEAARAYD VAARDIRGPK
101: AKLNFPPAVG APQAAAAVEG AGAHKKRRMV AAEESSASWS PLPATATGGG GTESLRERMS GLEAFLGLED GDVEPWEAVD LILE
101: AKLNFPPAVG APQAAAAVEG AGAHKKRRMV AAEESSASWS PLPATATGGG GTESLRERMS GLEAFLGLED GDVEPWEAVD LILE
001: MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
Arabidopsis Description
RAP2-3Ethylene-responsive transcription factor RAP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P42736]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.