Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27480 | Canola | nucleus | 91.33 | 92.75 |
| Bra021401.1-P | Field mustard | nucleus | 99.49 | 91.55 |
| AT2G47520.1 | Thale cress | nucleus | 59.18 | 67.84 |
| CDX72909 | Canola | nucleus | 38.27 | 39.89 |
| CDX68269 | Canola | nucleus | 38.27 | 33.94 |
| CDY50643 | Canola | nucleus | 38.78 | 33.48 |
| CDY37698 | Canola | mitochondrion | 27.55 | 31.95 |
| CDX82392 | Canola | nucleus | 37.24 | 29.8 |
| CDY28337 | Canola | nucleus | 36.73 | 29.63 |
| CDY34977 | Canola | nucleus | 36.22 | 29.46 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 27.04 | 29.44 |
| CDY54628 | Canola | nucleus | 36.73 | 29.39 |
| CDX92094 | Canola | nucleus | 36.22 | 29.34 |
| CDX96402 | Canola | nucleus | 37.24 | 29.2 |
| CDX95906 | Canola | nucleus | 36.22 | 29.1 |
| TraesCS1D01G230900.1 | Wheat | nucleus | 27.04 | 28.8 |
| CDY53788 | Canola | golgi | 28.06 | 28.06 |
| HORVU1Hr1G058940.4 | Barley | nucleus, plastid | 26.53 | 27.96 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 28.06 | 27.92 |
| TraesCS1B01G243200.1 | Wheat | nucleus | 26.02 | 27.57 |
| Os05t0361700-01 | Rice | nucleus | 27.55 | 27.27 |
| Zm00001d037941_P001 | Maize | nucleus | 26.53 | 26.94 |
| CDY17191 | Canola | nucleus | 29.08 | 26.39 |
| EES18078 | Sorghum | nucleus | 26.53 | 26.13 |
| CDY27952 | Canola | nucleus | 28.57 | 25.93 |
| CDX69647 | Canola | nucleus | 27.04 | 24.42 |
| CDY09787 | Canola | nucleus | 27.04 | 23.77 |
| CDX75756 | Canola | nucleus | 41.84 | 23.56 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 29.08 | 23.17 |
| CDX82492 | Canola | nucleus | 41.33 | 23.01 |
| CDY53152 | Canola | nucleus | 26.02 | 22.57 |
| CDY02492 | Canola | nucleus | 34.69 | 22.22 |
| CDY25681 | Canola | nucleus | 34.69 | 22.15 |
| CDY65334 | Canola | nucleus | 42.86 | 21.93 |
| CDX98435 | Canola | nucleus | 42.35 | 21.9 |
| CDY55173 | Canola | nucleus | 28.06 | 21.57 |
| CDY39107 | Canola | nucleus | 42.86 | 21.54 |
| CDX76278 | Canola | nucleus | 29.08 | 21.51 |
| CDY14051 | Canola | nucleus | 28.06 | 21.48 |
| CDY46253 | Canola | nucleus | 28.57 | 21.46 |
| CDX75430 | Canola | nucleus | 28.57 | 21.37 |
| CDX85656 | Canola | nucleus | 27.04 | 21.29 |
| CDX91131 | Canola | nucleus | 27.04 | 20.87 |
| CDY45310 | Canola | nucleus | 27.55 | 20.69 |
| CDX70027 | Canola | nucleus | 26.53 | 20.55 |
| CDX98982 | Canola | nucleus | 26.53 | 20.55 |
| CDX78517 | Canola | nucleus | 27.04 | 20.54 |
| CDX72481 | Canola | nucleus | 27.04 | 20.54 |
| CDX70498 | Canola | nucleus | 27.04 | 20.54 |
| CDX78288 | Canola | nucleus | 26.53 | 20.39 |
| CDX69054 | Canola | nucleus | 26.53 | 19.7 |
| CDX97559 | Canola | nucleus | 41.84 | 19.2 |
| CDX69056 | Canola | nucleus | 18.88 | 18.14 |
| CDY31304 | Canola | nucleus | 34.18 | 17.59 |
| CDY46821 | Canola | nucleus | 34.18 | 17.54 |
| CDY14506 | Canola | nucleus | 34.18 | 17.09 |
| CDY08853 | Canola | nucleus | 33.67 | 16.71 |
| CDX81250 | Canola | nucleus | 33.16 | 16.13 |
| CDY71587 | Canola | cytosol | 0.51 | 1.45 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078IQS6 | UniProt:A0A078IQS6 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY51428 | ProteinID:CDY51428 | ProteinID:CDY51428.1 | ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00003368001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EDDF81 | SEG:seg | : | : | : |
Description
BnaA04g27050DBnaA04g27050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQS6]
Coordinates
chrLK032993:-:65896..66918
Molecular Weight (calculated)
22364.4 Da
IEP (calculated)
9.655
GRAVY (calculated)
-0.828
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAVISDF IWSLRRASFA EAEPSQVGYE GCVSIEKRVC SGSVGGEKRK EKKKEGKNKR ERKNMYRGIR QRPWGKWAAE IRDPRKGVRV WLGTFKTAEE
101: AARAYDSAAI RIRGGKAKLN FPNDDSSSTR RNCIIKKNKE VYDTENQQVK QLSEELMAYE DYMGFYQIPY LDGQSSTEDV PQLSLIGNLW SFQDNV
101: AARAYDSAAI RIRGGKAKLN FPNDDSSSTR RNCIIKKNKE VYDTENQQVK QLSEELMAYE DYMGFYQIPY LDGQSSTEDV PQLSLIGNLW SFQDNV
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.