Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024325.1-P | Field mustard | nucleus | 96.68 | 95.95 |
| CDY08853 | Canola | nucleus | 95.15 | 94.43 |
| CDY31304 | Canola | nucleus | 79.08 | 81.36 |
| CDY46821 | Canola | nucleus | 78.57 | 80.63 |
| AT5G64750.1 | Thale cress | nucleus | 79.85 | 80.05 |
| CDX81250 | Canola | nucleus | 75.77 | 73.7 |
| KRH64120 | Soybean | nucleus | 26.02 | 36.3 |
| CDY37698 | Canola | mitochondrion | 15.31 | 35.5 |
| Solyc04g051360.2.1 | Tomato | nucleus | 27.04 | 34.98 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 23.21 | 34.34 |
| CDY27480 | Canola | nucleus | 16.84 | 34.2 |
| CDY51428 | Canola | nucleus | 17.09 | 34.18 |
| CDY53152 | Canola | nucleus | 19.39 | 33.63 |
| KRH53825 | Soybean | nucleus | 27.3 | 33.23 |
| CDY14051 | Canola | nucleus | 21.68 | 33.2 |
| CDY55173 | Canola | nucleus | 21.17 | 32.55 |
| CDY17191 | Canola | nucleus | 17.86 | 32.41 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 28.83 | 32.1 |
| CDX70027 | Canola | nucleus | 20.66 | 32.02 |
| CDX98982 | Canola | nucleus | 20.66 | 32.02 |
| CDY27952 | Canola | nucleus | 17.6 | 31.94 |
| CDX69647 | Canola | nucleus | 17.09 | 30.88 |
| CDY53788 | Canola | golgi | 15.31 | 30.61 |
| CDX78288 | Canola | nucleus | 19.9 | 30.59 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 24.49 | 30.57 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 25.51 | 30.49 |
| KRH43369 | Soybean | nucleus | 22.7 | 30.07 |
| CDY09787 | Canola | nucleus | 17.09 | 30.04 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 25.0 | 29.97 |
| CDX78517 | Canola | nucleus | 19.64 | 29.84 |
| CDX72909 | Canola | nucleus | 14.03 | 29.26 |
| CDX70498 | Canola | nucleus | 19.13 | 29.07 |
| KRH59504 | Soybean | nucleus | 25.51 | 28.99 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 25.0 | 28.74 |
| CDX85656 | Canola | nucleus | 18.11 | 28.51 |
| PGSC0003DMT400050718 | Potato | nucleus | 28.57 | 28.28 |
| CDX91131 | Canola | nucleus | 18.11 | 27.95 |
| CDX69054 | Canola | nucleus | 18.37 | 27.27 |
| CDX75430 | Canola | nucleus | 18.11 | 27.1 |
| CDY46253 | Canola | nucleus | 17.86 | 26.82 |
| CDX76278 | Canola | nucleus | 18.11 | 26.79 |
| CDY34977 | Canola | nucleus | 16.33 | 26.56 |
| CDX68269 | Canola | nucleus | 14.8 | 26.24 |
| CDY45310 | Canola | nucleus | 17.35 | 26.05 |
| CDX92094 | Canola | nucleus | 16.07 | 26.03 |
| CDX72481 | Canola | nucleus | 17.09 | 25.97 |
| CDY28337 | Canola | nucleus | 16.07 | 25.93 |
| CDX95906 | Canola | nucleus | 15.82 | 25.41 |
| CDY54628 | Canola | nucleus | 15.82 | 25.31 |
| CDX82392 | Canola | nucleus | 15.82 | 25.31 |
| OQU82952 | Sorghum | mitochondrion | 21.17 | 25.23 |
| Zm00001d053195_P002 | Maize | nucleus | 21.17 | 25.23 |
| CDY50643 | Canola | nucleus | 14.29 | 24.67 |
| CDX69056 | Canola | nucleus | 12.76 | 24.51 |
| OQU78803 | Sorghum | nucleus | 19.9 | 22.87 |
| CDX96402 | Canola | nucleus | 14.29 | 22.4 |
| CDX82492 | Canola | nucleus | 19.9 | 22.16 |
| CDX75756 | Canola | nucleus | 19.39 | 21.84 |
| CDY02492 | Canola | nucleus | 16.58 | 21.24 |
| CDY25681 | Canola | nucleus | 16.58 | 21.17 |
| CDY65334 | Canola | nucleus | 20.15 | 20.63 |
| Zm00001d023535_P001 | Maize | nucleus | 21.94 | 20.33 |
| CDX98435 | Canola | nucleus | 19.64 | 20.32 |
| CDY39107 | Canola | nucleus | 20.15 | 20.26 |
| Os12t0168100-01 | Rice | nucleus | 17.35 | 19.94 |
| CDX97559 | Canola | nucleus | 20.15 | 18.5 |
| CDY71587 | Canola | cytosol | 2.04 | 11.59 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FN58 | UniProt:A0A078FN58 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY14506 | ProteinID:CDY14506 | ProteinID:CDY14506.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00079211001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEC402 | SEG:seg | : | : | : | : |
Description
BnaC03g49530DBnaC03g49530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN58]
Coordinates
chrLK032044:+:50856..53688
Molecular Weight (calculated)
42974.0 Da
IEP (calculated)
6.593
GRAVY (calculated)
-0.861
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTIKVANQE GNVGKKAEPT TREDDHGTLS DIDQWLYLFA EDDNLHRDNA FTPPYSSSSL MTSYNSEMEM SAIVSALTHV VAGNVTTHQY GDGSGGGGEG
101: NSNSSSSSVQ KRRREVEEDG GGGKAVEAAN TLTVDQYFSS GSSTSKVREA SSNMSGGSGP TYEYTTTENG TTETSSSSGD QPRRRYRGVR QRPWGKWAAE
201: IRDPFKAARV WLGTFDNAES AARAYDEAAL RFRGNKAKLN FPENVKLVRP AATQSVPQTA VQRPTHLRNS GSTSTILPIR PASEQIVHSQ LLMQPYSMSY
301: SEMARQQQQF QHHHQQQSMD LYDQLSFSLP FGHTGDSTML STSSSSSHSR PLFSPAAVQQ PPESASETGY FKELKWSQDK TNNNNYNNSP SS
101: NSNSSSSSVQ KRRREVEEDG GGGKAVEAAN TLTVDQYFSS GSSTSKVREA SSNMSGGSGP TYEYTTTENG TTETSSSSGD QPRRRYRGVR QRPWGKWAAE
201: IRDPFKAARV WLGTFDNAES AARAYDEAAL RFRGNKAKLN FPENVKLVRP AATQSVPQTA VQRPTHLRNS GSTSTILPIR PASEQIVHSQ LLMQPYSMSY
301: SEMARQQQQF QHHHQQQSMD LYDQLSFSLP FGHTGDSTML STSSSSSHSR PLFSPAAVQQ PPESASETGY FKELKWSQDK TNNNNYNNSP SS
001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
Arabidopsis Description
ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.