Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59504 | Soybean | nucleus | 82.43 | 70.72 |
| KRH59733 | Soybean | cytosol, mitochondrion, nucleus | 17.57 | 42.62 |
| KRH71142 | Soybean | nucleus | 22.97 | 31.63 |
| KRH64120 | Soybean | nucleus | 29.73 | 31.32 |
| KRH50274 | Soybean | nucleus | 23.65 | 30.43 |
| KRH63877 | Soybean | nucleus | 20.27 | 29.85 |
| KRH53825 | Soybean | nucleus | 30.41 | 27.95 |
| KRH63879 | Soybean | nucleus | 24.66 | 27.86 |
| KRH01504 | Soybean | nucleus | 22.64 | 27.69 |
| KRH54084 | Soybean | nucleus | 25.0 | 27.51 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 23.65 | 26.42 |
| KRH35113 | Soybean | nucleus, plastid | 24.32 | 26.37 |
| KRH70063 | Soybean | nucleus | 20.27 | 26.32 |
| Solyc04g051360.2.1 | Tomato | nucleus | 26.69 | 26.07 |
| KRH08410 | Soybean | nucleus | 20.95 | 25.94 |
| KRH45195 | Soybean | nucleus | 23.99 | 25.63 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 30.41 | 25.57 |
| KRG91682 | Soybean | nucleus | 23.99 | 25.45 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 26.69 | 25.16 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 27.7 | 25.08 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 27.03 | 24.39 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 27.7 | 24.05 |
| KRH06816 | Soybean | nucleus | 20.95 | 23.85 |
| KRH12100 | Soybean | nucleus | 17.91 | 23.77 |
| Bra031903.1-P | Field mustard | nucleus | 30.41 | 23.75 |
| CDY31304 | Canola | nucleus | 30.41 | 23.62 |
| CDY46821 | Canola | nucleus | 30.07 | 23.3 |
| Zm00001d053195_P002 | Maize | nucleus | 25.68 | 23.1 |
| Bra024325.1-P | Field mustard | nucleus | 30.74 | 23.04 |
| CDY08853 | Canola | nucleus | 30.74 | 23.04 |
| AT5G64750.1 | Thale cress | nucleus | 30.07 | 22.76 |
| CDY14506 | Canola | nucleus | 30.07 | 22.7 |
| KRG96472 | Soybean | mitochondrion | 16.55 | 22.17 |
| KRH37061 | Soybean | nucleus | 17.57 | 21.94 |
| Bra037794.1-P | Field mustard | nucleus | 28.04 | 21.78 |
| OQU78803 | Sorghum | nucleus | 25.0 | 21.7 |
| CDX81250 | Canola | nucleus | 28.38 | 20.84 |
| OQU82952 | Sorghum | mitochondrion | 22.64 | 20.36 |
| PGSC0003DMT400050718 | Potato | nucleus | 27.03 | 20.2 |
| KRG97290 | Soybean | nucleus | 18.92 | 18.73 |
| KRG94719 | Soybean | nucleus | 21.28 | 18.48 |
| KRH69270 | Soybean | nucleus | 18.58 | 18.33 |
| KRH08660 | Soybean | nucleus | 28.04 | 18.32 |
| Zm00001d023535_P001 | Maize | nucleus | 26.01 | 18.2 |
| Os12t0168100-01 | Rice | nucleus | 20.95 | 18.18 |
| KRH31850 | Soybean | nucleus | 17.91 | 17.43 |
| KRH69017 | Soybean | nucleus | 20.27 | 17.39 |
| KRH70269 | Soybean | nucleus | 27.7 | 16.57 |
| KRH06265 | Soybean | nucleus | 20.61 | 15.97 |
| KRH47694 | Soybean | nucleus | 20.61 | 15.56 |
Protein Annotations
| EntrezGene:100792946 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02004851 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_08G145300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1KTD5 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH43369 | ProteinID:KRH43369 | ProteinID:KRH43369.1 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0001E23707 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:11040531..11042312
Molecular Weight (calculated)
33170.5 Da
IEP (calculated)
9.336
GRAVY (calculated)
-0.791
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKNDREKGN EVDQSYIQQH HSLSMPMMFS GFNREKEMSA MITALTRVVC GDYSLVHHNI DNTNSAIVGG GGGDDVSNMA SGSMPPSSTS LSHGGNSVLK
101: RRREDDNTSD FLRGGSFPAI LTTAEGSSTI RRRRANTVYD YEYRREKVKV EEEEEARRKY RGVRQRPWGK WAAEIRDPLK ARRVWLGTFE TAEDAARAYD
201: QASLRFRGNK AKLNFPENVR LRHTETLQGS RASSNFYDNS YSHVHDLPVS LYDQTTMASS STISMTSPQA PPSIYPTHLL PAWSSGYAYN SSSSSA
101: RRREDDNTSD FLRGGSFPAI LTTAEGSSTI RRRRANTVYD YEYRREKVKV EEEEEARRKY RGVRQRPWGK WAAEIRDPLK ARRVWLGTFE TAEDAARAYD
201: QASLRFRGNK AKLNFPENVR LRHTETLQGS RASSNFYDNS YSHVHDLPVS LYDQTTMASS STISMTSPQA PPSIYPTHLL PAWSSGYAYN SSSSSA
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.