Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69270 | Soybean | nucleus | 91.12 | 92.33 |
| KRG96472 | Soybean | mitochondrion | 49.34 | 67.87 |
| Solyc09g075420.2.1 | Tomato | nucleus | 45.72 | 53.46 |
| VIT_07s0005g00820.t01 | Wine grape | nucleus | 45.39 | 53.28 |
| GSMUA_Achr11P... | Banana | nucleus | 34.54 | 52.76 |
| PGSC0003DMT400081322 | Potato | nucleus | 47.7 | 52.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.51 | 51.39 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 30.26 | 50.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.91 | 41.45 |
| KRH12100 | Soybean | nucleus | 28.95 | 39.46 |
| KRH37061 | Soybean | nucleus | 28.95 | 37.13 |
| KRH59733 | Soybean | cytosol, mitochondrion, nucleus | 14.47 | 36.07 |
| KRG97290 | Soybean | nucleus | 34.54 | 35.12 |
| KRH69017 | Soybean | nucleus | 38.82 | 34.2 |
| KRH06265 | Soybean | nucleus | 37.5 | 29.84 |
| KRH47694 | Soybean | nucleus | 37.5 | 29.08 |
| KRH63877 | Soybean | nucleus | 17.76 | 26.87 |
| KRH50274 | Soybean | nucleus | 18.75 | 24.78 |
| KRH70063 | Soybean | nucleus | 18.09 | 24.12 |
| KRH08410 | Soybean | nucleus | 17.76 | 22.59 |
| KRH71142 | Soybean | nucleus | 15.79 | 22.33 |
| KRH35113 | Soybean | nucleus, plastid | 19.41 | 21.61 |
| KRH63879 | Soybean | nucleus | 18.42 | 21.37 |
| KRH54084 | Soybean | nucleus | 18.75 | 21.19 |
| KRG91682 | Soybean | nucleus | 19.41 | 21.15 |
| KRH06816 | Soybean | nucleus | 17.76 | 20.77 |
| KRH01504 | Soybean | nucleus | 16.45 | 20.66 |
| KRH64120 | Soybean | nucleus | 18.75 | 20.28 |
| KRH43369 | Soybean | nucleus | 17.43 | 17.91 |
| KRH45195 | Soybean | nucleus | 15.79 | 17.33 |
| KRH53825 | Soybean | nucleus | 18.09 | 17.08 |
| KRG94719 | Soybean | nucleus | 18.42 | 16.42 |
| KRH59504 | Soybean | nucleus | 18.09 | 15.94 |
| KRH08660 | Soybean | nucleus | 19.74 | 13.24 |
| KRH70269 | Soybean | nucleus | 20.07 | 12.32 |
Protein Annotations
| EntrezGene:100780763 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02006088 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EMBL:BT097738 | UniProt:C6TJ94 | ncoils:Coil | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_10G016500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH31850 |
| ProteinID:KRH31850 | ProteinID:KRH31850.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF77 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0001B165B8 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:1475606..1477360
Molecular Weight (calculated)
34362.9 Da
IEP (calculated)
5.291
GRAVY (calculated)
-0.862
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIADF IPRRGGRRLT ASELWPNSFG KDGDFDFDYS HIADQQRSTL KMSPPPKASE QVENKPVKRQ RKNLYRGIRQ RPWGKWAAEI RDPRKGVRVW
101: LGTFNTAEEA ARAYDREARK IRGKKAKVNF PNEDDEYSIQ ARHPIPPLPF TPQTQNPPLY QQQYRCDLNI APKNLNFEFG YDLNHAGAFP SHVDAVNADS
201: VVVSGDENSG LASGSEGAYS TTEFMGSSQN GNGYLGVTAM EKNEKETEVI EAQEEKNKVQ ELSEELMAYE NYMKFYQIPY YDGQSTAPPN NVQESLVGDL
301: WSFD
101: LGTFNTAEEA ARAYDREARK IRGKKAKVNF PNEDDEYSIQ ARHPIPPLPF TPQTQNPPLY QQQYRCDLNI APKNLNFEFG YDLNHAGAFP SHVDAVNADS
201: VVVSGDENSG LASGSEGAYS TTEFMGSSQN GNGYLGVTAM EKNEKETEVI EAQEEKNKVQ ELSEELMAYE NYMKFYQIPY YDGQSTAPPN NVQESLVGDL
301: WSFD
001: MCGGAIISDY APLVTKAKGR KLTAEELWSE LDASAADDFW GFYSTSKLHP TNQVNVKEEA VKKEQATEPG KRRKRKNVYR GIRKRPWGKW AAEIRDPRKG
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
101: VRVWLGTFNT AEEAAMAYDV AAKQIRGDKA KLNFPDLHHP PPPNYTPPPS SPRSTDQPPA KKVCVVSQSE SELSQPSFPV ECIGFGNGDE FQNLSYGFEP
201: DYDLKQQISS LESFLELDGN TAEQPSQLDE SVSEVDMWML DDVIASYE
Arabidopsis Description
RAP2-3Ethylene-responsive transcription factor RAP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P42736]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.