CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08410	Soybean	nucleus	90.35	86.19
KRH59733	Soybean	cytosol, mitochondrion, nucleus	25.88	48.36
KRH63877	Soybean	nucleus	30.7	34.83
KRH01504	Soybean	nucleus	35.53	33.47
KRH06816	Soybean	nucleus	36.84	32.31
KRH45195	Soybean	nucleus	35.53	29.24
KRH63879	Soybean	nucleus	32.89	28.63
KRH54084	Soybean	nucleus	33.33	28.25
Solyc12g042210.1.1	Tomato	nucleus	35.09	27.87
KRG91682	Soybean	nucleus	33.77	27.6
KRH35113	Soybean	nucleus, plastid	32.89	27.47
KRG96472	Soybean	mitochondrion	23.68	24.43
KRH50274	Soybean	nucleus	24.56	24.35
KRH12100	Soybean	nucleus	23.68	24.22
KRG94719	Soybean	nucleus	35.96	24.05
KRH64120	Soybean	nucleus	29.39	23.84
KRH71142	Soybean	nucleus	22.37	23.72
KRH37061	Soybean	nucleus	23.68	22.78
KRH53825	Soybean	nucleus	31.58	22.36
KRH43369	Soybean	nucleus	26.32	20.27
KRH59504	Soybean	nucleus	28.51	18.84
KRG97290	Soybean	nucleus	24.12	18.39
KRH69270	Soybean	nucleus	24.12	18.33
KRH08660	Soybean	nucleus	36.4	18.32
KRH31850	Soybean	nucleus	24.12	18.09
KRH69017	Soybean	nucleus	26.75	17.68
KRH70269	Soybean	nucleus	37.28	17.17
KRH06265	Soybean	nucleus	26.32	15.71
KRH47694	Soybean	nucleus	26.75	15.56

Protein Annotations

EntrezGene:100796480	MapMan:15.5.7.1	MapMan:15.5.7.2	Gene3D:3.30.730.10	EMBL:ACUP02000745	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EMBL:BT099398	UniProt:C6TNR7	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G066200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH70063
ProteinID:KRH70063	ProteinID:KRH70063.1	EMBL:KT031070	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF41	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001B170C6	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:5878333..5880650

Molecular Weight (calculated)

24853.4 Da

IEP (calculated)

7.624

GRAVY (calculated)

-0.775

Length

228 amino acids

Sequence
(BLAST)

001: MSNNKNNTFF PTPHGQISTS EFVNSQNPPQ ATNQGIDDIR KKHYRGVRQR PWGKWAAEIR DPKKAARVWL GTFDTAEAAA MAYDAAALRF KGNKAKLNFP
101: ERVVMPIPPQ TNNNNSTSSS APTTQSSSSL PPPQSLHNNS SLSAEGFPNL EEYARLLSCS DDDDFQRVAL GLYQHHNNED FICGSSQPPP VPFFVSSSSS
201: SSAMTSSYSD FLGQGGSTGF DEGNKRGS

Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)

001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY

Arabidopsis Description

ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.