CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63877	Soybean	nucleus	59.84	36.32
KRH63879	Soybean	nucleus	61.48	28.63
KRH54084	Soybean	nucleus	61.48	27.88
KRH70063	Soybean	nucleus	48.36	25.88
KRH01504	Soybean	nucleus	49.18	24.79
KRH08410	Soybean	nucleus	47.54	24.27
GSMUA_Achr11P...	Banana	nucleus	48.36	23.05
KRH06816	Soybean	nucleus	46.72	21.92
KRH45195	Soybean	nucleus	49.18	21.66
KRH50274	Soybean	nucleus	40.16	21.3
KRH35113	Soybean	nucleus, plastid	45.9	20.51
KRG91682	Soybean	nucleus	46.72	20.43
KRH12100	Soybean	nucleus	36.89	20.18
KRH71142	Soybean	nucleus	35.25	20.0
KRH64120	Soybean	nucleus	45.9	19.93
KRG96472	Soybean	mitochondrion	34.43	19.0
KRH37061	Soybean	nucleus	36.89	18.99
KRH43369	Soybean	nucleus	42.62	17.57
KRG94719	Soybean	nucleus	47.54	17.01
KRH53825	Soybean	nucleus	43.44	16.46
KRH59504	Soybean	nucleus	43.44	15.36
KRG97290	Soybean	nucleus	36.89	15.05
KRH31850	Soybean	nucleus	36.07	14.47
KRH69270	Soybean	nucleus	35.25	14.33
KRH69017	Soybean	nucleus	36.89	13.04
KRH08660	Soybean	nucleus	45.08	12.14
KRH47694	Soybean	nucleus	38.52	11.99
KRH06265	Soybean	nucleus	36.89	11.78
KRH70269	Soybean	nucleus	45.9	11.31

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A0R0K4X8	EMBL:ACUP02003338	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_05G200100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH59733	ProteinID:KRH59733	ProteinID:KRH59733.1
PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF41
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0006EDF6BA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:38383021..38383526

Molecular Weight (calculated)

13645.1 Da

IEP (calculated)

9.247

GRAVY (calculated)

-0.594

Length

122 amino acids

Sequence
(BLAST)

001: MGANCFVEMY GHVCVGVRQR PWGKWASEIR DPKKAARVWL GTFETAEAAA LAYDEAALRF KGTKAKLNFP ERVHFSKEFG YLTNRPSLFH ASATPLSDQH
101: SQSSTSEPPR KPTCDLDGKD KL

Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)

001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY

Arabidopsis Description

ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.