CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50274	Soybean	nucleus	78.6	73.48
PGSC0003DMT400021312	Potato	nucleus, plastid	31.16	43.51
PGSC0003DMT400021311	Potato	nucleus	31.16	43.23
VIT_03s0063g00460.t01	Wine grape	nucleus	46.05	40.08
Solyc10g050970.1.1	Tomato	nucleus	40.0	38.56
GSMUA_Achr7P18930_001	Banana	nucleus	24.65	38.13
Bra034624.1-P	Field mustard	nucleus	28.37	36.09
GSMUA_Achr6P02310_001	Banana	nucleus	33.02	35.86
KRH59733	Soybean	cytosol, mitochondrion, nucleus	20.0	35.25
CDX72481	Canola	nucleus	40.0	33.33
CDY45310	Canola	nucleus	40.0	32.95
GSMUA_Achr3P06960_001	Banana	nucleus	35.81	32.77
CDX69054	Canola	nucleus	40.0	32.58
TraesCS5B01G236900.1	Wheat	nucleus	36.28	32.23
CDY46253	Canola	nucleus	39.07	32.18
AT4G34410.1	Thale cress	nucleus	40.0	32.09
CDX76278	Canola	nucleus	39.53	32.08
TraesCS5A01G238400.1	Wheat	nucleus	35.81	31.95
Solyc01g108240.2.1	Tomato	nucleus	43.72	31.86
Bra017656.1-P	Field mustard	nucleus	40.0	31.85
Bra011529.1-P	Field mustard	nucleus	38.6	31.68
CDX75430	Canola	nucleus	38.6	31.68
TraesCS5D01G245300.1	Wheat	nucleus	35.81	31.3
PGSC0003DMT400066343	Potato	nucleus	42.79	31.19
TraesCS1A01G370600.1	Wheat	nucleus	36.28	30.47
TraesCS1D01G376800.1	Wheat	nucleus	37.67	30.34
TraesCS1B01G389700.1	Wheat	nucleus	35.35	30.28
TraesCS1A01G370700.1	Wheat	nucleus	37.21	30.19
TraesCS1B01G389900.1	Wheat	nucleus	37.21	29.96
CDX69056	Canola	nucleus	28.37	29.9
TraesCS1D01G376600.1	Wheat	nucleus	36.74	29.81
Zm00001d031796_P001	Maize	nucleus	37.21	29.74
TraesCS1B01G389800.1	Wheat	nucleus	35.81	29.73
Zm00001d005892_P001	Maize	nucleus	36.28	29.66
Os09t0457900-01	Rice	nucleus	37.21	29.2
TraesCS1D01G376700.1	Wheat	nucleus	35.81	28.95
TraesCS1A01G370400.1	Wheat	nucleus	34.88	28.85
HORVU1Hr1G082310.1	Barley	nucleus	35.35	28.79
Os08t0474000-01	Rice	nucleus	29.3	28.77
HORVU5Hr1G068450.1	Barley	nucleus	35.35	28.36
TraesCS1D01G376500.1	Wheat	nucleus	34.88	27.68
OQU80635	Sorghum	nucleus	36.74	27.05
EER96855	Sorghum	mitochondrion, nucleus	36.74	26.87
KRH63877	Soybean	nucleus	22.33	23.88
KRH43369	Soybean	nucleus	31.63	22.97
KRH64120	Soybean	nucleus	29.77	22.78
KRH01504	Soybean	nucleus	25.58	22.73
KRH70063	Soybean	nucleus	23.72	22.37
KRH63879	Soybean	nucleus	26.51	21.76
KRH06816	Soybean	nucleus	26.05	21.54
KRH12100	Soybean	nucleus	22.33	21.52
KRH54084	Soybean	nucleus	25.58	20.45
KRH59504	Soybean	nucleus	32.09	20.0
KRH37061	Soybean	nucleus	21.86	19.83
KRH08410	Soybean	nucleus	21.86	19.67
KRH45195	Soybean	nucleus	25.12	19.49
KRG96472	Soybean	mitochondrion	20.0	19.46
KRH35113	Soybean	nucleus, plastid	24.65	19.41
KRG91682	Soybean	nucleus	24.65	19.0
KRH53825	Soybean	nucleus	27.91	18.63
KRG94719	Soybean	nucleus	26.51	16.72
KRH31850	Soybean	nucleus	22.33	15.79
KRH69270	Soybean	nucleus	21.86	15.67
KRG97290	Soybean	nucleus	20.93	15.05
KRH08660	Soybean	nucleus	31.16	14.79
KRH69017	Soybean	nucleus	21.4	13.33
KRH70269	Soybean	nucleus	30.23	13.13
KRH06265	Soybean	nucleus	22.33	12.57
KRH47694	Soybean	nucleus	22.33	12.24

Protein Annotations

EntrezGene:100794381	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02000872	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G132500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
UniProt:I1JEU3	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH71142	ProteinID:KRH71142	ProteinID:KRH71142.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF41	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0002337B57	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:13731474..13732535

Molecular Weight (calculated)

23841.8 Da

IEP (calculated)

4.926

GRAVY (calculated)

-0.473

Length

215 amino acids

Sequence
(BLAST)

001: MSSSSSSFFP AHITTDQEFS LIVAALTNVV SGSTSSSSVP EFRFPHSSPP LSAASLMPPP LPSIHTCREC NIAGCLGCNF FPEEQRKKYR GVRQRPSGKW
101: AAEIRDRHRS ARVWLGTFET AEDAARAYDK ASFELRGPRA KLNFPLVDES LTLQPEMAAT EEQINNEDNL NQGMGMDSHE FWDRINEADF HPFMMMMDFT
201: GDSSDSAATG YTLSS

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.