Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g050970.1.1 | Tomato | nucleus | 76.62 | 52.91 |
| PGSC0003DMT400021311 | Potato | nucleus | 46.75 | 46.45 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 40.26 | 44.6 |
| Bra034624.1-P | Field mustard | nucleus | 42.21 | 38.46 |
| PGSC0003DMT400066343 | Potato | nucleus | 65.58 | 34.24 |
| KRH50274 | Soybean | nucleus | 48.7 | 32.61 |
| KRH71142 | Soybean | nucleus | 43.51 | 31.16 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 49.35 | 30.77 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 37.66 | 29.29 |
| Os08t0474000-01 | Rice | nucleus | 41.56 | 29.22 |
| CDX72481 | Canola | nucleus | 46.75 | 27.91 |
| PGSC0003DMT400011537 | Potato | mitochondrion, nucleus | 33.77 | 27.81 |
| CDY45310 | Canola | nucleus | 46.75 | 27.59 |
| CDX69054 | Canola | nucleus | 46.75 | 27.27 |
| Bra011529.1-P | Field mustard | nucleus | 45.45 | 26.72 |
| CDX75430 | Canola | nucleus | 45.45 | 26.72 |
| AT4G34410.1 | Thale cress | nucleus | 46.1 | 26.49 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 41.56 | 26.45 |
| CDX76278 | Canola | nucleus | 45.45 | 26.42 |
| Bra017656.1-P | Field mustard | nucleus | 46.1 | 26.3 |
| PGSC0003DMT400010296 | Potato | nucleus | 34.42 | 26.11 |
| CDY46253 | Canola | nucleus | 44.16 | 26.05 |
| CDX69056 | Canola | nucleus | 34.42 | 25.98 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 40.26 | 25.73 |
| PGSC0003DMT400010297 | Potato | nucleus | 33.12 | 25.63 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 40.91 | 25.61 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 38.96 | 25.53 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 40.91 | 25.1 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 42.21 | 25.1 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 43.51 | 25.09 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 41.56 | 25.0 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 42.86 | 24.91 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 42.21 | 24.62 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 42.21 | 24.34 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 40.91 | 24.23 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 41.56 | 24.06 |
| Zm00001d031796_P001 | Maize | nucleus | 41.56 | 23.79 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 40.91 | 23.77 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 40.91 | 23.51 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 40.91 | 23.25 |
| Zm00001d005892_P001 | Maize | nucleus | 38.31 | 22.43 |
| OQU80635 | Sorghum | nucleus | 41.56 | 21.92 |
| EER96855 | Sorghum | mitochondrion, nucleus | 41.56 | 21.77 |
| Os09t0457900-01 | Rice | nucleus | 38.31 | 21.53 |
| PGSC0003DMT400065732 | Potato | nucleus | 31.17 | 20.87 |
| PGSC0003DMT400043311 | Potato | nucleus | 33.12 | 19.32 |
| PGSC0003DMT400036934 | Potato | nucleus | 31.17 | 17.39 |
| PGSC0003DMT400081322 | Potato | nucleus | 30.52 | 16.91 |
| PGSC0003DMT400048407 | Potato | nucleus | 39.61 | 15.44 |
| PGSC0003DMT400060659 | Potato | nucleus | 33.77 | 15.34 |
| PGSC0003DMT400050718 | Potato | nucleus | 34.42 | 13.38 |
| PGSC0003DMT400012547 | Potato | nucleus | 31.82 | 13.17 |
| PGSC0003DMT400016306 | Potato | nucleus | 35.71 | 12.47 |
| PGSC0003DMT400023609 | Potato | nucleus | 31.17 | 12.31 |
| PGSC0003DMT400074248 | Potato | nucleus | 29.22 | 11.6 |
Protein Annotations
| EntrezGene:102605756 | Gene3D:3.30.730.10 | MapMan:35.1 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | UniProt:M1AEW8 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400008264 | PGSC:PGSC0003DMG400008264 | EnsemblPlants:PGSC0003DMT400021312 |
| PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI000294E745 | RefSeq:XP_015165133.1 | SEG:seg | : | : |
Description
Wound-responsive AP2 like factor 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400008264]
Coordinates
chr10:-:43591295..43592051
Molecular Weight (calculated)
17618.2 Da
IEP (calculated)
10.036
GRAVY (calculated)
-0.945
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGCNYFATS STGNNNKTLK INVAKKKKNY RGVRQRPWGK WAAEIRDPRR AARVWLGTFT TAEDVARAYD RAAIEFRGPR AKLNFSFADY TSIQQHNNNN
101: NNNTSSSPLQ VQQQQGTNTE EQFWDQLMIS NNEIQDFLNT MSFNGESSDF ANSF
101: NNNTSSSPLQ VQQQQGTNTE EQFWDQLMIS NNEIQDFLNT MSFNGESSDF ANSF
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVMT TISTEDDRRR QQHASPDRPI K
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVMT TISTEDDRRR QQHASPDRPI K
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.