Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g090800.1.1 | Tomato | nucleus | 54.27 | 82.44 |
| PGSC0003DMT400010296 | Potato | nucleus | 76.88 | 75.37 |
| Solyc02g090790.1.1 | Tomato | nucleus | 78.39 | 68.72 |
| PGSC0003DMT400011537 | Potato | mitochondrion, nucleus | 59.8 | 63.64 |
| PGSC0003DMT400021311 | Potato | nucleus | 27.64 | 35.48 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 25.63 | 33.12 |
| VIT_07s0031g00710.t01 | Wine grape | nucleus | 27.64 | 29.57 |
| VIT_07s0031g00720.t01 | Wine grape | nucleus | 29.65 | 27.44 |
| PGSC0003DMT400065732 | Potato | nucleus | 27.64 | 23.91 |
| PGSC0003DMT400066343 | Potato | nucleus | 31.16 | 21.02 |
| PGSC0003DMT400036934 | Potato | nucleus | 28.14 | 20.29 |
| PGSC0003DMT400043311 | Potato | nucleus | 24.62 | 18.56 |
| PGSC0003DMT400060659 | Potato | nucleus | 29.65 | 17.4 |
| PGSC0003DMT400081322 | Potato | nucleus | 24.12 | 17.27 |
| PGSC0003DMT400050718 | Potato | nucleus | 32.66 | 16.41 |
| PGSC0003DMT400048407 | Potato | nucleus | 31.66 | 15.95 |
| PGSC0003DMT400016306 | Potato | nucleus | 29.65 | 13.38 |
| PGSC0003DMT400012547 | Potato | nucleus | 24.62 | 13.17 |
| PGSC0003DMT400023609 | Potato | nucleus | 24.62 | 12.56 |
| PGSC0003DMT400074248 | Potato | nucleus | 24.12 | 12.37 |
Protein Annotations
| EntrezGene:102580229 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:M0ZXU0 | PFAM:PF00847 | EnsemblPlantsGene:PGSC0003DMG400004025 | PGSC:PGSC0003DMG400004025 | EnsemblPlants:PGSC0003DMT400010297 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295E0C3 | RefSeq:XP_015168992.1 |
Description
AP2 domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400004025]
Coordinates
chr2:+:43906222..43906821
Molecular Weight (calculated)
22774.7 Da
IEP (calculated)
4.713
GRAVY (calculated)
-0.689
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MTILCQENEC YTLAHKLTQD QENYYMVSAL RHVVSGTGDG RVNDEAAQLL LEVQNASSGR SNIDVELERG KKRRRNTKKE FRGVRQRPWG KWAAEIRDPH
101: KAQQLWLGTF VTAEDAARAY DKKAIEFRGE KAITNFPITE YADEINKSPT VVMEELIQVI NGVEVAVNGE NSMQNGDEDD DFWETLEDDG LVKRINMFF
101: KAQQLWLGTF VTAEDAARAY DKKAIEFRGE KAITNFPITE YADEINKSPT VVMEELIQVI NGVEVAVNGE NSMQNGDEDD DFWETLEDDG LVKRINMFF
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.