Factsheet for PGSC0003DMT400036934

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g118190.2.1	Tomato	nucleus	77.17	87.3
PGSC0003DMT400065732	Potato	nucleus	43.12	51.74
Bra019622.1-P	Field mustard	nucleus	38.41	46.7
CDY53152	Canola	nucleus	36.59	44.69
AT5G61890.1	Thale cress	nucleus	39.86	44.35
VIT_17s0000g00200.t01	Wine grape	nucleus	39.49	44.31
CDX70027	Canola	nucleus	39.13	42.69
CDX98982	Canola	nucleus	39.13	42.69
Bra009272.1-P	Field mustard	nucleus	39.13	42.69
KRH63879	Soybean	nucleus	40.22	42.37
Bra029302.1-P	Field mustard	nucleus	38.41	41.73
CDY14051	Canola	nucleus	38.41	41.41
KRH54084	Soybean	nucleus	40.22	41.26
CDX78288	Canola	nucleus	38.04	41.18
Bra028703.1-P	Field mustard	nucleus	38.04	41.18
CDY55173	Canola	nucleus	38.04	41.18
Bra005932.1-P	Field mustard	nucleus	38.04	41.18
AT5G07310.1	Thale cress	nucleus	39.13	41.06
KRH63877	Soybean	nucleus	29.71	40.8
CDY71587	Canola	cytosol	9.42	37.68
PGSC0003DMT400021311	Potato	nucleus	18.12	32.26
PGSC0003DMT400021312	Potato	nucleus, plastid	17.39	31.17
PGSC0003DMT400011537	Potato	mitochondrion, nucleus	20.29	29.95
PGSC0003DMT400010296	Potato	nucleus	21.38	29.06
PGSC0003DMT400010297	Potato	nucleus	20.29	28.14
PGSC0003DMT400060659	Potato	nucleus	26.81	21.83
PGSC0003DMT400043311	Potato	nucleus	20.29	21.21
PGSC0003DMT400050718	Potato	nucleus	30.43	21.21
PGSC0003DMT400048407	Potato	nucleus	29.71	20.76
PGSC0003DMT400081322	Potato	nucleus	19.93	19.78
PGSC0003DMT400066343	Potato	nucleus	20.29	18.98
PGSC0003DMT400016306	Potato	nucleus	28.99	18.14
PGSC0003DMT400012547	Potato	nucleus	21.01	15.59
PGSC0003DMT400023609	Potato	nucleus	19.57	13.85
PGSC0003DMT400074248	Potato	nucleus	19.2	13.66

Protein Annotations

EntrezGene:102578712	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
UniProt:M1B4I9	PFAM:PF00847	EnsemblPlantsGene:PGSC0003DMG400014240	PGSC:PGSC0003DMG400014240	EnsemblPlants:PGSC0003DMT400036934	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF41	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295CECC
RefSeq:XP_006341471.1	SEG:seg	:	:	:	:

Description

Ethylene-responsive transcription factor ERF114 [Source:PGSC_GENE;Acc:PGSC0003DMG400014240]

Coordinates

chr3:-:57768986..57771196

Molecular Weight (calculated)

31102.0 Da

IEP (calculated)

4.806

GRAVY (calculated)

-1.038

Length

276 amino acids

Sequence
(BLAST)

001: MKRSGSNNER EEKDTSNIFP IYSSARSQQD MSAMVSALSQ VIGNSSSSAG GDSSVDAVHV NPLTLIPQST QQNQSQSSIQ DQGNSERRRY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAEGAALAYD EAALRFKGNK AKLNFPERVQ GQFQYFNQHQ FTPATSSNNT FEQNYPNVHH YADLLLRSDN NIDLNFDASP
201: STCYQYSSSG SSFDISQSSV ELPVYDEQQQ VSTNYNYQED EEEDFMKYSG SHFGNSTSSG GPQHDESNWE EYKQEK

Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)

001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY

Arabidopsis Description

ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.