Factsheet for Bra019622.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53152	Canola	nucleus	91.63	92.04
Bra029302.1-P	Field mustard	nucleus	84.58	75.59
AT5G61890.1	Thale cress	nucleus	81.94	75.0
Bra009272.1-P	Field mustard	nucleus	70.04	62.85
Bra005932.1-P	Field mustard	nucleus	67.4	60.0
Bra028703.1-P	Field mustard	nucleus	63.88	56.86
Solyc03g118190.2.1	Tomato	nucleus	44.49	41.39
PGSC0003DMT400036934	Potato	nucleus	46.7	38.41
KRH63879	Soybean	nucleus	44.05	38.17
KRH54084	Soybean	nucleus	44.49	37.55
KRH63877	Soybean	nucleus	33.04	37.31
VIT_17s0000g00200.t01	Wine grape	nucleus	39.21	36.18
Bra008835.1-P	Field mustard	nucleus	33.04	34.56
GSMUA_Achr11P...	Banana	nucleus	37.89	33.59
Bra023404.1-P	Field mustard	nucleus	35.68	32.53
Bra021871.1-P	Field mustard	nucleus	29.96	31.48
Bra005480.1-P	Field mustard	nucleus	29.96	31.48
Bra006195.1-P	Field mustard	nucleus	35.68	31.4
Bra034624.1-P	Field mustard	nucleus	22.47	30.18
Bra021401.1-P	Field mustard	nucleus	22.91	24.41
Bra011529.1-P	Field mustard	nucleus	25.55	22.14
Bra022176.1-P	Field mustard	nucleus	22.91	21.49
Bra031903.1-P	Field mustard	nucleus	34.8	20.84
Bra017656.1-P	Field mustard	nucleus	24.67	20.74
Bra021200.1-P	Field mustard	nucleus	22.03	20.58
Bra024325.1-P	Field mustard	nucleus	34.36	19.75
Bra037794.1-P	Field mustard	nucleus	33.04	19.68
Bra001640.1-P	Field mustard	nucleus	21.15	19.59
Bra016063.1-P	Field mustard	nucleus	21.15	19.12
Bra003883.1-P	Field mustard	nucleus	20.26	18.93
Bra030919.1-P	Field mustard	nucleus	22.03	16.34
Bra001541.1-P	Field mustard	nucleus	23.35	15.06
Bra021543.1-P	Field mustard	nucleus	23.35	14.52
Bra027355.1-P	Field mustard	nucleus	23.79	14.25

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra019622	EnsemblPlants:Bra019622.1
EnsemblPlants:Bra019622.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0043565	GO:GO:0050832	InterPro:IPR001471
InterPro:IPR036955	UniProt:M4DSX9	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF41	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000253EF05	SEG:seg	:

Description

AT5G61890 (E=2e-051) | AP2 domain-containing transcription factor family protein

Coordinates

chrA06:+:11693509..11694569

Molecular Weight (calculated)

25498.9 Da

IEP (calculated)

4.816

GRAVY (calculated)

-0.989

Length

227 amino acids

Sequence
(BLAST)

001: MPFGGDEPEE KEEAEEDENL FPVFSARSQH DMRVMVSALT QVIGNQQSIS QDSPSVYNPQ DPSQPVAPSH QDQGNSMRRR RYRGVRQRPW GKWAAEIRDP
101: QKAARVWLGT FETAESAALA YDEAALKFKG SKAKLNFPER VNVAYNDQLS NSNYYSSNQI EPKNIPYYNQ YYQDGNNTDM LSFSLTTSTT AATTSSSSGG
201: SSRPQEEQDY ARFWRFGDSS SSSQSGL

Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)

001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY

Arabidopsis Description

ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.