Factsheet for Bra011529.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75430	Canola	nucleus	99.62	99.62
Bra034624.1-P	Field mustard	nucleus	51.53	79.88
AT4G34410.1	Thale cress	nucleus	76.72	75.0
Bra017656.1-P	Field mustard	nucleus	77.1	74.81
PGSC0003DMT400021311	Potato	nucleus	29.39	49.68
PGSC0003DMT400021312	Potato	nucleus, plastid	26.72	45.45
GSMUA_Achr7P18930_001	Banana	nucleus	21.76	41.01
Solyc10g050970.1.1	Tomato	nucleus	34.73	40.81
KRH50274	Soybean	nucleus	35.5	40.43
VIT_03s0063g00460.t01	Wine grape	nucleus	37.4	39.68
GSMUA_Achr3P06960_001	Banana	nucleus	35.11	39.15
KRH71142	Soybean	nucleus	31.68	38.6
GSMUA_Achr6P02310_001	Banana	nucleus	29.01	38.38
TraesCS5B01G236900.1	Wheat	nucleus	32.82	35.54
TraesCS1B01G389700.1	Wheat	nucleus	33.97	35.46
TraesCS5A01G238400.1	Wheat	nucleus	32.06	34.85
TraesCS1B01G389800.1	Wheat	nucleus	34.35	34.75
PGSC0003DMT400066343	Potato	nucleus	38.93	34.58
TraesCS1D01G376800.1	Wheat	nucleus	35.11	34.46
TraesCS1A01G370700.1	Wheat	nucleus	34.73	34.34
Solyc01g108240.2.1	Tomato	nucleus	38.55	34.24
TraesCS1D01G376600.1	Wheat	nucleus	34.35	33.96
TraesCS1A01G370600.1	Wheat	nucleus	32.82	33.59
TraesCS1A01G370400.1	Wheat	nucleus	33.21	33.46
TraesCS1B01G389900.1	Wheat	nucleus	33.97	33.33
TraesCS5D01G245300.1	Wheat	nucleus	31.3	33.33
Zm00001d031796_P001	Maize	nucleus	33.59	32.71
TraesCS1D01G376700.1	Wheat	nucleus	32.82	32.33
HORVU1Hr1G082310.1	Barley	nucleus	32.44	32.2
Os08t0474000-01	Rice	nucleus	26.34	31.51
Os09t0457900-01	Rice	nucleus	32.82	31.39
Zm00001d005892_P001	Maize	nucleus	31.3	31.18
TraesCS1D01G376500.1	Wheat	nucleus	31.68	30.63
HORVU5Hr1G068450.1	Barley	nucleus	31.3	30.6
EER96855	Sorghum	mitochondrion, nucleus	33.97	30.27
OQU80635	Sorghum	nucleus	33.21	29.79
Bra005480.1-P	Field mustard	nucleus	22.14	26.85
Bra021871.1-P	Field mustard	nucleus	21.76	26.39
Bra021401.1-P	Field mustard	nucleus	21.37	26.29
Bra019622.1-P	Field mustard	nucleus	22.14	25.55
Bra008835.1-P	Field mustard	nucleus	20.99	25.35
Bra005932.1-P	Field mustard	nucleus	22.9	23.53
Bra023404.1-P	Field mustard	nucleus	22.14	23.29
Bra006195.1-P	Field mustard	nucleus	22.9	23.26
Bra021200.1-P	Field mustard	nucleus	21.37	23.05
Bra009272.1-P	Field mustard	nucleus	22.14	22.92
Bra029302.1-P	Field mustard	nucleus	22.14	22.83
Bra028703.1-P	Field mustard	nucleus	22.14	22.75
Bra022176.1-P	Field mustard	nucleus	20.61	22.31
Bra001640.1-P	Field mustard	nucleus	19.85	21.22
Bra031903.1-P	Field mustard	nucleus	28.24	19.53
Bra037794.1-P	Field mustard	nucleus	27.86	19.16
Bra003883.1-P	Field mustard	nucleus	17.56	18.93
Bra024325.1-P	Field mustard	nucleus	27.1	17.97
Bra016063.1-P	Field mustard	nucleus	16.79	17.53
Bra001541.1-P	Field mustard	nucleus	20.23	15.06
Bra021543.1-P	Field mustard	nucleus	20.23	14.52
Bra027355.1-P	Field mustard	nucleus	20.99	14.51
Bra030919.1-P	Field mustard	nucleus	16.79	14.38

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra011529	EnsemblPlants:Bra011529.1
EnsemblPlants:Bra011529.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D4X2	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF62	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254570A	SEG:seg

Description

AT4G34410 (E=7e-075) RRTF1 | RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1); DNA binding / transcription factor

Coordinates

chrA01:-:1811541..1812329

Molecular Weight (calculated)

28789.0 Da

IEP (calculated)

5.407

GRAVY (calculated)

-0.794

Length

262 amino acids

Sequence
(BLAST)

001: MHYPNNRPEL SSGAPSPDRD LTRYPYHNQE QELSVIVSAL QHVISGENET APYQGFSSTV ISAGMARSDS DACQVCRIDG CLGCNYFYAP NQRIENRHHQ
101: QVEAEEEGVS NSRGESHVAA AEGGGKVRKR KNKKNGYRGV RQRPWGKFAA EIRDPKRATR VWLGTFETAE DAARAYDRAA IGFRGPRAKL NFPFADYTSS
201: ADDVGTSASA NASTSVSATE SAEAEQWRGG DCDMDEYLKM MMMDFGNGDS SDSGNTIADM FQ

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.