Factsheet for Os09t0457900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G238400.1	Wheat	nucleus	58.39	66.39
TraesCS5B01G236900.1	Wheat	nucleus	58.03	65.7
TraesCS5D01G245300.1	Wheat	nucleus	58.03	64.63
HORVU5Hr1G068450.1	Barley	nucleus	58.03	59.33
GSMUA_Achr7P18930_001	Banana	nucleus	27.74	54.68
Zm00001d031796_P001	Maize	nucleus	48.18	49.07
GSMUA_Achr6P02310_001	Banana	nucleus	35.4	48.99
Os08t0474000-01	Rice	nucleus	38.32	47.95
GSMUA_Achr3P06960_001	Banana	nucleus	40.51	47.23
OQU80635	Sorghum	nucleus	50.0	46.92
PGSC0003DMT400021311	Potato	nucleus	25.91	45.81
Os02t0764700-01	Rice	nucleus	38.32	43.39
PGSC0003DMT400021312	Potato	nucleus, plastid	21.53	38.31
KRH50274	Soybean	nucleus	31.75	37.83
KRH71142	Soybean	nucleus	29.2	37.21
Bra034624.1-P	Field mustard	nucleus	22.63	36.69
Solyc10g050970.1.1	Tomato	nucleus	28.83	35.43
CDX72481	Canola	nucleus	32.85	34.88
CDY45310	Canola	nucleus	32.85	34.48
CDY46253	Canola	nucleus	32.48	34.1
CDX76278	Canola	nucleus	32.85	33.96
VIT_03s0063g00460.t01	Wine grape	nucleus	30.29	33.6
Bra017656.1-P	Field mustard	nucleus	32.48	32.96
Bra011529.1-P	Field mustard	nucleus	31.39	32.82
CDX75430	Canola	nucleus	31.39	32.82
CDX69054	Canola	nucleus	31.02	32.2
AT4G34410.1	Thale cress	nucleus	31.39	32.09
Os05t0361700-01	Rice	nucleus	21.53	29.8
Solyc01g108240.2.1	Tomato	nucleus	30.66	28.47
PGSC0003DMT400066343	Potato	nucleus	30.29	28.14
CDX69056	Canola	nucleus	20.44	27.45
Os01t0313300-01	Rice	nucleus	20.07	26.57
Os04t0398000-02	Rice	nucleus	21.9	22.39
Os12t0168100-01	Rice	nucleus	22.63	18.18
Os07t0617000-02	Rice	nucleus	21.53	17.25
Os03t0183000-02	Rice	plastid	20.8	17.07
Os06t0194000-02	Rice	nucleus	21.17	16.02
Os09t0434500-01	Rice	vacuole	22.63	15.66
Os02t0782700-01	Rice	nucleus	20.8	15.62

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:4347266	EMBL:AK067195	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAD38371.1	ProteinID:BAF25285.1	ProteinID:BAT08447.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os09g0457900	EnsemblPlants:Os09t0457900-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF62	UniProt:Q67U00
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0000426541	RefSeq:XP_015611044.1	SEG:seg	:

Description

ETHYLENE RESPONSE FACTOR 102AP2/ERF transcription factor, Regulation of the internode elongation (Os09t0457900-01)

Coordinates

chr9:+:17306100..17307199

Molecular Weight (calculated)

29191.2 Da

IEP (calculated)

6.280

GRAVY (calculated)

-0.385

Length

274 amino acids

Sequence
(BLAST)

001: MTKKVIPAMA AARQDSCKTK LDERGGSHQA PSSARWISSE QEHSIIVAAL RYVVSGCTTP PPEIVTVACG EACALCGIDG CLGCDFFGAE AAGNEEAVMA
101: TDYAAAAAAA AVAGGSGGKR VRRRRKKNVY RGVRHRPWGK WAAEIRDPRR AVRKWLGTFD TAEEAARAYD RAALEFRGAR AKLNFPCSEP LPMPSQRNGN
201: GGDAVTAATT TAEQMTPTLS PCSADAEETT TPVDWQMGAD EAGSNQLWDG LQDLMKLDEA DTWFPPFSGA ASSF

Best Arabidopsis Sequence Match ( AT4G34410.1 )
(BLAST)

001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ

Arabidopsis Description

ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.