Factsheet for Os04t0398000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G304800.1	Wheat	nucleus	64.55	68.38
TraesCS2A01G288000.1	Wheat	nucleus	63.81	68.13
TraesCS2D01G286300.1	Wheat	nucleus	64.18	67.98
HORVU2Hr1G071270.4	Barley	nucleus	39.55	59.89
GSMUA_Achr10P...	Banana	nucleus	42.16	49.78
GSMUA_Achr6P08140_001	Banana	nucleus	43.28	41.73
VIT_01s0150g00120.t01	Wine grape	nucleus, plastid	35.45	40.08
AT5G13330.1	Thale cress	nucleus	31.34	39.62
CDX69647	Canola	nucleus	29.85	36.87
Bra008835.1-P	Field mustard	nucleus	29.48	36.41
CDY09787	Canola	nucleus	30.22	36.32
OQU81440	Sorghum	nucleus	66.42	35.89
GSMUA_Achr2P21430_001	Banana	nucleus, plastid	37.31	34.36
KRH01504	Soybean	nucleus	29.85	33.06
CDX70498	Canola	nucleus	30.97	32.17
CDX78517	Canola	nucleus	30.97	32.17
Bra006195.1-P	Field mustard	nucleus	30.6	31.78
CDX85656	Canola	nucleus	29.1	31.33
Bra023404.1-P	Field mustard	nucleus	29.1	31.33
CDX91131	Canola	nucleus	28.73	30.32
KRH45195	Soybean	nucleus	30.22	29.24
Os12t0168100-01	Rice	nucleus	35.07	27.57
Os05t0361700-01	Rice	nucleus	19.78	26.77
Os08t0474000-01	Rice	nucleus	21.64	26.48
Os01t0313300-01	Rice	nucleus	19.4	25.12
Os02t0764700-01	Rice	nucleus	20.52	22.73
Os09t0457900-01	Rice	nucleus	22.39	21.9
Os03t0183000-02	Rice	plastid	22.76	18.26
Os02t0782700-01	Rice	nucleus	22.01	16.16
Os06t0194000-02	Rice	nucleus	21.64	16.02
Os07t0617000-02	Rice	nucleus	19.4	15.2
Os09t0434500-01	Rice	vacuole	22.39	15.15

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:4335707	EMBL:AK101501	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAF14583.1	ProteinID:BAS89019.1	ProteinID:CAE05154.2	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os04g0398000	EnsemblPlants:Os04t0398000-02
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF73	UniProt:Q7XLG6
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00001B1B56	RefSeq:XP_015636603.1	SEG:seg	:

Description

ETHYLENE RESPONSE FACTOR 101Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os04t0398000-01);Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os04t0398000-02)

Coordinates

chr4:+:19651755..19656024

Molecular Weight (calculated)

27807.4 Da

IEP (calculated)

10.216

GRAVY (calculated)

-0.420

Length

268 amino acids

Sequence
(BLAST)

001: MVTALAHVIR AAPDLHLPHH PSSSASAAAH PQQASSFYPT AAAAASSPSD QLAAAAAAEE QGRRRHYRGV RQRPWGKWAA EIRDPKKAAR VWLGTFDTAE
101: DAAIAYDEAA LRFKGTKAKL NFPERVQGRT DLGFLVTRGI PPAATHGGGY YPSSSPAAGA CPPPRQQQTV VPYPDLMRYA QLLQGGVGGS YMPFGGAATM
201: SSSTVSSSSA PQILDFSTQQ LIRAGPPSPM PSSGSGSATA AASSTTSASS PGAWPYGGSE RKKKDSSS

Best Arabidopsis Sequence Match ( AT5G13330.1 )
(BLAST)

001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE

Arabidopsis Description

ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.