Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78517 | Canola | nucleus | 99.61 | 99.61 |
| CDX70498 | Canola | nucleus | 98.45 | 98.45 |
| Bra008835.1-P | Field mustard | nucleus | 72.09 | 85.71 |
| Bra023404.1-P | Field mustard | nucleus | 80.62 | 83.53 |
| AT5G13330.1 | Thale cress | nucleus | 65.89 | 80.19 |
| KRH01504 | Soybean | nucleus | 37.98 | 40.5 |
| VIT_01s0150g00120.t01 | Wine grape | nucleus, plastid | 36.43 | 39.66 |
| KRH45195 | Soybean | nucleus | 41.86 | 38.99 |
| HORVU2Hr1G071270.4 | Barley | nucleus | 26.74 | 38.98 |
| GSMUA_Achr10P... | Banana | nucleus | 31.78 | 36.12 |
| Bra009272.1-P | Field mustard | nucleus | 35.27 | 35.97 |
| Bra019622.1-P | Field mustard | nucleus | 31.4 | 35.68 |
| Bra028703.1-P | Field mustard | nucleus | 34.88 | 35.29 |
| Bra029302.1-P | Field mustard | nucleus | 34.5 | 35.04 |
| Bra005932.1-P | Field mustard | nucleus | 34.5 | 34.9 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 32.95 | 33.86 |
| TraesCS2D01G286300.1 | Wheat | nucleus | 32.95 | 33.6 |
| Bra034624.1-P | Field mustard | nucleus | 21.71 | 33.14 |
| TraesCS2B01G304800.1 | Wheat | nucleus | 32.17 | 32.81 |
| Bra005480.1-P | Field mustard | nucleus | 27.13 | 32.41 |
| Bra021871.1-P | Field mustard | nucleus | 26.74 | 31.94 |
| Os04t0398000-02 | Rice | nucleus | 31.78 | 30.6 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 33.72 | 29.9 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 32.17 | 29.86 |
| Bra021401.1-P | Field mustard | nucleus | 20.93 | 25.35 |
| Bra021200.1-P | Field mustard | nucleus | 21.71 | 23.05 |
| Bra011529.1-P | Field mustard | nucleus | 23.26 | 22.9 |
| Bra017656.1-P | Field mustard | nucleus | 23.64 | 22.59 |
| Bra001640.1-P | Field mustard | nucleus | 20.93 | 22.04 |
| Bra022176.1-P | Field mustard | nucleus | 20.54 | 21.9 |
| Bra003883.1-P | Field mustard | nucleus | 20.16 | 21.4 |
| Bra016063.1-P | Field mustard | nucleus | 20.54 | 21.12 |
| Bra024325.1-P | Field mustard | nucleus | 30.23 | 19.75 |
| Bra031903.1-P | Field mustard | nucleus | 28.68 | 19.53 |
| Bra037794.1-P | Field mustard | nucleus | 28.29 | 19.16 |
| OQU81440 | Sorghum | nucleus | 35.27 | 18.35 |
| Bra001541.1-P | Field mustard | nucleus | 22.09 | 16.19 |
| Bra021543.1-P | Field mustard | nucleus | 22.09 | 15.62 |
| Bra030919.1-P | Field mustard | nucleus | 18.22 | 15.36 |
| Bra027355.1-P | Field mustard | nucleus | 21.71 | 14.78 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra006195 | EnsemblPlants:Bra006195.1 |
| EnsemblPlants:Bra006195.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4CPQ6 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF58 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000253FA57 | SEG:seg |
Description
AT5G13330 (E=1e-058) Rap2.6L | Rap2.6L (related to AP2 6L); DNA binding / transcription factor
Coordinates
chrA03:+:2468562..2470993
Molecular Weight (calculated)
28898.0 Da
IEP (calculated)
5.715
GRAVY (calculated)
-0.947
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSVFIPNL YGKGLVPPET SAAENPSWNE SDVTAMISSL SRAIEYPTAD GHDPVKEELD KSDQLQQDQD QPRKRHYRGV RQRPWGKWAA EIRDPKKAAR
101: VWLGTFETAE DAALAYDRAA LKFKGTKAKL NFPERVQGPS TTSYVASQSG TDHAPRGGSE LMSSPPQLGP SSTTTTTTSW PVNYNQDILQ YAQLLTSNSD
201: VDLSYYTSSL FSQQQQPFST PSSSSSSSLA FQQTQQQQQQ QREDEKSYGY HYYNYPRE
101: VWLGTFETAE DAALAYDRAA LKFKGTKAKL NFPERVQGPS TTSYVASQSG TDHAPRGGSE LMSSPPQLGP SSTTTTTTSW PVNYNQDILQ YAQLLTSNSD
201: VDLSYYTSSL FSQQQQPFST PSSSSSSSLA FQQTQQQQQQ QREDEKSYGY HYYNYPRE
001: MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
101: PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK
201: NYGYNYYNYP RE
Arabidopsis Description
ERF113Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.