Factsheet for Bra027355.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97559	Canola	nucleus	98.68	87.59
Bra021543.1-P	Field mustard	nucleus	78.63	81.64
Bra001541.1-P	Field mustard	nucleus	72.03	77.56
AT3G14230.1	Thale cress	nucleus	76.52	76.52
Bra030919.1-P	Field mustard	nucleus	54.35	67.32
TraesCS5D01G320800.1	Wheat	nucleus	23.22	44.44
TraesCS5A01G314600.1	Wheat	nucleus	23.48	43.63
TraesCS5B01G315500.2	Wheat	nucleus	23.48	42.38
Os01t0313300-01	Rice	nucleus	22.96	42.03
Bra021401.1-P	Field mustard	nucleus	21.9	38.97
EES00666	Sorghum	nucleus	23.22	38.77
Zm00001d009103_P001	Maize	nucleus	23.22	38.26
Zm00001d040651_P001	Maize	nucleus	23.48	37.55
Bra003883.1-P	Field mustard	nucleus	23.48	36.63
Bra022176.1-P	Field mustard	nucleus	22.16	34.71
Bra021200.1-P	Field mustard	nucleus	22.16	34.57
Bra016063.1-P	Field mustard	nucleus	22.69	34.26
Bra001640.1-P	Field mustard	nucleus	21.9	33.88
Bra034624.1-P	Field mustard	nucleus	13.19	29.59
HORVU5Hr1G080790.1	Barley	nucleus	23.22	29.43
Bra005480.1-P	Field mustard	nucleus	15.57	27.31
Bra021871.1-P	Field mustard	nucleus	15.57	27.31
Zm00001d007033_P001	Maize	plastid	18.73	25.0
Bra019622.1-P	Field mustard	nucleus	14.25	23.79
Bra008835.1-P	Field mustard	nucleus	13.46	23.5
Bra028703.1-P	Field mustard	nucleus	15.57	23.14
Bra009272.1-P	Field mustard	nucleus	15.3	22.92
Bra005932.1-P	Field mustard	nucleus	15.3	22.75
Bra029302.1-P	Field mustard	nucleus	14.78	22.05
Bra006195.1-P	Field mustard	nucleus	14.78	21.71
Bra023404.1-P	Field mustard	nucleus	14.25	21.69
Bra011529.1-P	Field mustard	nucleus	14.51	20.99
Bra031903.1-P	Field mustard	nucleus	20.84	20.84
Bra024325.1-P	Field mustard	nucleus	20.58	19.75
Bra037794.1-P	Field mustard	nucleus	19.79	19.68
Bra017656.1-P	Field mustard	nucleus	13.72	19.26

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra027355	EnsemblPlants:Bra027355.1
EnsemblPlants:Bra027355.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EEZ3	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF66	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002547DD2	SEG:seg

Description

AT3G14230 (E=7e-134) RAP2.2 | RAP2.2; DNA binding / transcription factor

Coordinates

chrA05:+:20490480..20492182

Molecular Weight (calculated)

41824.0 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.804

Length

379 amino acids

Sequence
(BLAST)

001: MCGGAIISEF IPPSRSRRVT SEHLWPDLKN KGKASKKKRS GFIDLDDEFE ADFQGFKDDA SFDCEDEFDV DDDVFADVKP FVFAAGAKPV ASPPAAFAST
101: GSVSGKKTIE SGGQAEKSAK RKRKNQYRGI RQRPWGKWAA EIRDPRKGSR EWLGTFDTAE EAARAYDAAA RRIRGNKAKV NFPEEMVPSV SQKRPSAKKA
201: VAKPNQSPAS VQQPTHVSQY CNNSFDNMGH DSSFGDVSFM EEKPQMYNNQ FFDVGGNNGY QYFSSDQGSN SLDCSEFGWS DQTPKTPEIS SMLVNNNQAP
301: FIEETNPAKK LKTSSEDGTS NNDSSDDLMA YLNNALWESP LEVEAMFGGD AATMTQEEGN PMDLWSLDDI NSMLDGGVF

Best Arabidopsis Sequence Match ( AT3G14230.3 )
(BLAST)

001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF

Arabidopsis Description

RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.