Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G320800.1 | Wheat | nucleus | 94.61 | 97.47 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 92.65 | 90.0 |
| Os01t0313300-01 | Rice | nucleus | 71.08 | 70.05 |
| EES00666 | Sorghum | nucleus | 69.12 | 62.11 |
| Zm00001d009103_P001 | Maize | nucleus | 68.63 | 60.87 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 89.22 | 60.87 |
| Zm00001d040651_P001 | Maize | nucleus | 70.1 | 60.34 |
| Zm00001d007033_P001 | Maize | plastid | 57.84 | 41.55 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 27.45 | 31.11 |
| CDX75756 | Canola | nucleus | 42.16 | 24.71 |
| Bra030919.1-P | Field mustard | nucleus | 36.76 | 24.51 |
| CDY02492 | Canola | nucleus | 36.76 | 24.51 |
| Bra001541.1-P | Field mustard | nucleus | 42.16 | 24.43 |
| CDX82492 | Canola | nucleus | 42.16 | 24.43 |
| CDY25681 | Canola | nucleus | 36.76 | 24.43 |
| Bra021543.1-P | Field mustard | nucleus | 43.63 | 24.38 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 42.16 | 24.36 |
| CDX98435 | Canola | nucleus | 44.12 | 23.75 |
| Bra027355.1-P | Field mustard | nucleus | 43.63 | 23.48 |
| TraesCS4A01G005600.1 | Wheat | nucleus, plastid | 36.27 | 23.42 |
| CDY65334 | Canola | nucleus | 43.63 | 23.24 |
| CDY39107 | Canola | nucleus | 43.63 | 22.82 |
| AT3G14230.1 | Thale cress | nucleus | 42.16 | 22.69 |
| AT1G53910.1 | Thale cress | nucleus | 39.22 | 22.35 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 28.43 | 22.31 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 41.18 | 22.28 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 27.94 | 22.27 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 25.98 | 21.99 |
| TraesCS6A01G319500.1 | Wheat | nucleus | 20.1 | 21.81 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 42.16 | 21.61 |
| TraesCS7A01G264100.1 | Wheat | plastid | 24.02 | 21.59 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 27.94 | 21.51 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 35.29 | 21.18 |
| CDX97559 | Canola | nucleus | 43.63 | 20.84 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 25.49 | 20.72 |
| TraesCS6A01G319600.1 | Wheat | nucleus | 25.0 | 20.65 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 35.29 | 19.89 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 34.31 | 19.23 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 27.45 | 17.07 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF14 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5A01G314600 | EnsemblPlants:TraesCS5A01G314600.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:525025891..525026586
Molecular Weight (calculated)
22097.0 Da
IEP (calculated)
6.922
GRAVY (calculated)
-0.397
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIIYDY IPAHRRRVST ADFWPDADHS DAHSAAPDKA PRAKRGRTNQ YRGIRQRPWG KWAAEIRDPV KGVRVWLGTY PTAEAAARAY DRAARRIRGA
101: KAKVNFPNEI LVGAPAHEAP CTMAAVLPSP KKEEEPAACS CEEVKALSEE LMAYESYMSF LGVPYMEGGS AAATAPAAVG VAAEDAPAEL WSFEDSYYPG
201: PLGL
101: KAKVNFPNEI LVGAPAHEAP CTMAAVLPSP KKEEEPAACS CEEVKALSEE LMAYESYMSF LGVPYMEGGS AAATAPAAVG VAAEDAPAEL WSFEDSYYPG
201: PLGL
001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N
Arabidopsis Description
ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.