Factsheet for TraesCS7A01G264100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G265000.1	Wheat	plastid	94.27	95.54
TraesCS7B01G162100.1	Wheat	plastid	92.51	93.75
Zm00001d031673_P001	Maize	nucleus	40.97	47.94
OQU80805	Sorghum	nucleus	48.9	36.88
TraesCS2A01G288000.1	Wheat	nucleus	33.04	29.88
TraesCS6A01G319500.1	Wheat	nucleus	23.35	28.19
TraesCS1A01G231200.1	Wheat	nucleus	21.59	27.22
TraesCS1A01G370600.1	Wheat	nucleus	29.07	25.78
KRH06816	Soybean	nucleus	29.52	25.77
TraesCS5A01G238400.1	Wheat	nucleus	27.31	25.73
TraesCS1A01G370700.1	Wheat	nucleus	29.96	25.66
TraesCS6A01G319600.1	Wheat	nucleus	27.31	25.1
TraesCS1A01G370400.1	Wheat	nucleus	27.75	24.23
TraesCS5A01G314600.1	Wheat	nucleus	21.59	24.02
TraesCS5A01G112600.1	Wheat	nucleus	33.04	22.87
VIT_14s0068g01040.t01	Wine grape	nucleus	29.07	20.5
KRG94719	Soybean	nucleus	29.96	19.94
TraesCS4A01G005600.1	Wheat	nucleus, plastid	25.11	18.04
TraesCS7A01G377400.1	Wheat	nucleus	23.79	15.88
TraesCS6A01G097700.1	Wheat	nucleus	25.11	15.75
TraesCS5A01G215900.1	Wheat	nucleus	25.11	15.12
TraesCS6A01G097500.1	Wheat	nucleus	24.23	15.11
TraesCS6A01G343300.1	Wheat	nucleus	25.11	14.32
TraesCS7A01G158000.1	Wheat	nucleus	20.7	13.31

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF73	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS7A01G264100	EnsemblPlants:TraesCS7A01G264100.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr7A:+:262473773..262475099

Molecular Weight (calculated)

23620.6 Da

IEP (calculated)

11.325

GRAVY (calculated)

-0.504

Length

227 amino acids

Sequence
(BLAST)

001: MVAALTHVIS STRPGPAAAA GATAPGQQAV TRQHSAPLAV AATSSSSTAS EQQQQRPRYR GVRQRPWGKW AAEIRDPVKA ARVWLGTFDT AEDAARAYDA
101: AALRFKGAKA KLNFPGAGGA PAPPRHAVGQ LLAPGGGASP SMRQQQRPVV VAFRPQINSL AAVAREEFPD LHRYAHILQS GDVDLRAVAA GGNTPGQSSS
201: STPAHDSRSP PRPDDRGYGE RSAGPGC

Best Arabidopsis Sequence Match ( AT2G33710.1 )
(BLAST)

001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.