Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G158500.1 | Wheat | nucleus | 97.73 | 97.18 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 96.88 | 96.34 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 89.8 | 81.28 |
| Os06t0194000-02 | Rice | nucleus | 63.46 | 61.88 |
| EER87998 | Sorghum | nucleus | 61.76 | 60.89 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 55.24 | 48.99 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 42.78 | 44.41 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 44.76 | 43.65 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 44.48 | 43.13 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 24.36 | 42.16 |
| KRG97290 | Soybean | nucleus | 34.56 | 40.8 |
| VIT_09s0002g00470.t01 | Wine grape | nucleus | 43.06 | 40.11 |
| KRH69017 | Soybean | nucleus | 38.53 | 39.42 |
| PGSC0003DMT400012547 | Potato | nucleus | 40.51 | 38.44 |
| Solyc06g063070.2.1 | Tomato | nucleus | 40.51 | 38.44 |
| KRH06265 | Soybean | nucleus | 39.66 | 36.65 |
| KRH47694 | Soybean | nucleus | 40.23 | 36.22 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 33.71 | 36.06 |
| Solyc03g123500.2.1 | Tomato | nucleus | 39.38 | 36.01 |
| PGSC0003DMT400023609 | Potato | nucleus | 38.53 | 34.87 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 35.41 | 33.16 |
| Solyc12g049560.1.1 | Tomato | nucleus | 35.69 | 32.64 |
| TraesCS4A01G005600.1 | Wheat | nucleus, plastid | 29.18 | 32.59 |
| PGSC0003DMT400074248 | Potato | nucleus | 35.69 | 32.47 |
| TraesCS1A01G231200.1 | Wheat | nucleus | 16.43 | 32.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.43 | 31.55 |
| TraesCS6A01G319500.1 | Wheat | nucleus | 12.18 | 22.87 |
| TraesCS2A01G288000.1 | Wheat | nucleus | 16.15 | 22.71 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 16.43 | 22.31 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 16.71 | 22.26 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 15.01 | 21.99 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 15.86 | 21.88 |
| Zm00001d047339_P001 | Maize | plastid | 26.91 | 21.06 |
| TraesCS6A01G319600.1 | Wheat | nucleus | 14.73 | 21.05 |
| TraesCS7A01G264100.1 | Wheat | plastid | 13.31 | 20.7 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 15.86 | 17.07 |
| Zm00001d045386_P002 | Maize | plastid | 15.3 | 13.24 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS7A01G158000 | EnsemblPlants:TraesCS7A01G158000.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:112263526..112265643
Molecular Weight (calculated)
38728.9 Da
IEP (calculated)
4.443
GRAVY (calculated)
-0.616
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAILSDI IPPPRRATGG NVWRADKKKR ARADAAAGRP RRAPEEFEEE GDAEFEADFE GFVEAEEESD GEGKPFPVRR SGFSGDGLKA TAAGDDDCAS
101: GSAKRKRKNQ FRGIRRRPWG KWAAEIRDPR KGVRVWLGTY NSAEEAARAY DVEARRIRGK KAKVNFPEEA PMAPQQRCAT SVKVPEFNTE QKPVLNTMGN
201: ADVYSCPAVD YTINQQFVQP QNMSFVPTVN AVEAPFMNFS SDQGSNSFSC SDFSWENDIK TPDITSVPAS IPTSTEVNES AFLQNNGINS TVPPVMGDAN
301: VDLADLEPYM KFLMDDGSDE SIDSILSCDV PQDVVGNMGL WTFDDMPLSA GFY
101: GSAKRKRKNQ FRGIRRRPWG KWAAEIRDPR KGVRVWLGTY NSAEEAARAY DVEARRIRGK KAKVNFPEEA PMAPQQRCAT SVKVPEFNTE QKPVLNTMGN
201: ADVYSCPAVD YTINQQFVQP QNMSFVPTVN AVEAPFMNFS SDQGSNSFSC SDFSWENDIK TPDITSVPAS IPTSTEVNES AFLQNNGINS TVPPVMGDAN
301: VDLADLEPYM KFLMDDGSDE SIDSILSCDV PQDVVGNMGL WTFDDMPLSA GFY
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEGS
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
101: VFGKKVTGLD GDAEKSANRK RKNQYRGIRQ RPWGKWAAEI RDPREGARIW LGTFKTAEEA ARAYDAAARR IRGSKAKVNF PEENMKANSQ KRSVKANLQK
201: PVAKPNPNPS PALVQNSNIS FENMCFMEEK HQVSNNNNNQ FGMTNSVDAG CNGYQYFSSD QGSNSFDCSE FGWSDQAPIT PDISSAVINN NNSALFFEEA
301: NPAKKLKSMD FETPYNNTEW DASLDFLNED AVTTQDNGAN PMDLWSIDEI HSMIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.