Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P10870_001 | Banana | nucleus | 35.29 | 55.7 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 48.13 | 54.55 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 20.86 | 50.65 |
| GSMUA_Achr10P... | Banana | nucleus | 35.83 | 49.81 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 28.34 | 46.09 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 33.69 | 45.99 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 22.46 | 45.65 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 28.88 | 43.55 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 42.25 | 43.53 |
| GSMUA_Achr11P... | Banana | nucleus | 22.99 | 43.22 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 37.17 | 42.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.6 | 42.59 |
| GSMUA_Achr10P... | Banana | nucleus | 32.62 | 42.51 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 40.11 | 39.06 |
| Os02t0782700-01 | Rice | nucleus | 36.36 | 37.26 |
| EER87998 | Sorghum | nucleus | 35.56 | 37.15 |
| TraesCS6B01G126700.1 | Wheat | nucleus, plastid | 23.26 | 36.86 |
| Zm00001d045044_P001 | Maize | nucleus, plastid | 35.29 | 36.36 |
| Os06t0194000-02 | Rice | nucleus | 35.03 | 36.19 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 13.1 | 35.25 |
| TraesCSU01G183700.1 | Wheat | nucleus | 26.47 | 34.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.66 | 34.62 |
| HORVU6Hr1G082880.1 | Barley | nucleus | 33.96 | 34.42 |
| TraesCS7B01G062200.1 | Wheat | nucleus | 32.35 | 34.08 |
| TraesCS7D01G158500.1 | Wheat | nucleus | 32.35 | 34.08 |
| TraesCS6B01G375400.1 | Wheat | nucleus | 36.1 | 33.92 |
| TraesCS7A01G158000.1 | Wheat | nucleus | 31.55 | 33.43 |
| EES07642 | Sorghum | nucleus | 32.89 | 33.42 |
| TraesCS6D01G324200.1 | Wheat | nucleus | 35.29 | 33.17 |
| TraesCS6A01G343300.1 | Wheat | nucleus | 35.29 | 33.17 |
| HORVU6Hr1G017530.1 | Barley | nucleus | 34.49 | 32.99 |
| Zm00001d052087_P001 | Maize | nucleus | 31.82 | 32.96 |
| TraesCS7D01G416300.1 | Wheat | nucleus | 28.88 | 32.63 |
| TraesCS7D01G378200.1 | Wheat | nucleus | 24.06 | 32.26 |
| TraesCS7B01G283900.1 | Wheat | nucleus | 24.06 | 32.26 |
| HORVU0Hr1G021820.1 | Barley | nucleus | 24.6 | 32.17 |
| HORVU7Hr1G032750.1 | Barley | nucleus, plastid | 33.16 | 31.79 |
| TraesCS6D01G084200.1 | Wheat | nucleus | 32.09 | 31.66 |
| TraesCS6B01G126600.1 | Wheat | nucleus | 30.75 | 31.42 |
| HORVU6Hr1G082840.1 | Barley | nucleus | 26.2 | 31.41 |
| HORVU6Hr1G076090.2 | Barley | nucleus | 26.74 | 31.25 |
| TraesCS7A01G377400.1 | Wheat | nucleus | 28.34 | 31.18 |
| TraesCS6A01G097700.1 | Wheat | nucleus | 29.95 | 30.94 |
| TraesCS6D01G085000.1 | Wheat | nucleus | 26.74 | 30.86 |
| TraesCS7B01G324400.1 | Wheat | nucleus | 25.67 | 30.77 |
| HORVU6Hr1G083520.2 | Barley | nucleus, plastid | 26.47 | 30.65 |
| TraesCS6A01G097500.1 | Wheat | nucleus | 29.68 | 30.49 |
| TraesCS7D01G373700.1 | Wheat | nucleus | 29.14 | 30.36 |
| HORVU7Hr1G090440.1 | Barley | nucleus | 29.68 | 29.68 |
| TraesCS6D01G084900.1 | Wheat | nucleus | 30.75 | 29.56 |
| HORVU6Hr1G064370.1 | Barley | nucleus | 22.73 | 29.31 |
| TraesCS6B01G125900.1 | Wheat | nucleus | 28.88 | 28.05 |
| TraesCS7B01G278700.1 | Wheat | nucleus | 28.61 | 27.94 |
| TraesCS6B01G427100.1 | Wheat | nucleus | 23.8 | 26.89 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 13.9 | 26.4 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 13.9 | 26.26 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 17.38 | 24.53 |
| GSMUA_Achr10P... | Banana | nucleus | 14.71 | 24.23 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 14.71 | 23.81 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 14.71 | 23.4 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 14.97 | 22.76 |
| Zm00001d018305_P001 | Maize | nucleus | 16.58 | 21.99 |
| GSMUA_Achr11P... | Banana | nucleus | 14.97 | 21.88 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 15.24 | 19.59 |
| Zm00001d047339_P001 | Maize | plastid | 23.53 | 19.51 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 13.9 | 18.7 |
| GSMUA_Achr10P... | Banana | nucleus | 14.17 | 18.03 |
| Zm00001d045386_P002 | Maize | plastid | 14.44 | 13.24 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG19380_001 | EnsemblPlants:GSMUA_AchrUn_randomP19380_001 | EnsemblPlants:GSMUA_AchrUn_randomT19380_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0UAJ7 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF44 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295A9DC | SEG:seg |
Description
Putative Ethylene-responsive transcription factor 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19380_001]
Coordinates
chrchrUn_random:+:93165307..93167630
Molecular Weight (calculated)
41554.7 Da
IEP (calculated)
4.569
GRAVY (calculated)
-0.736
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDL IPATVARRVT AEHLWPGGRR RRGKQQRREV EEDFEADFLE FDDESGEDEF EDEFDDEVDA NSSGFGSNTS FSREISVTLR SRGFGGPACK
101: SGKRKRKSQF RGIRQRPWGR WAAEIRDPCK GVRVWLGTFD SAEQAARAYD AEARRIRGHK AKVNFPAGSK SGAKKSILKP TAPRTHTSNM SEKLECKHSD
201: HPNDQDCVFY SAMGLLEEEL TKPDYFYPFA SEGPSAPCEG LDFHSAEEGA EESDSFGHPE FIWEHEDKTP EIKLVDVPTA IEGNGTGLLG DDGHQENLKN
301: GCGAESSAEE TTAIKLSKNL YAFDSYMNFL QFPYTEGSSN VSLDCLFGGE LAQDDFSTVN LWSFDDLPME GSVY
101: SGKRKRKSQF RGIRQRPWGR WAAEIRDPCK GVRVWLGTFD SAEQAARAYD AEARRIRGHK AKVNFPAGSK SGAKKSILKP TAPRTHTSNM SEKLECKHSD
201: HPNDQDCVFY SAMGLLEEEL TKPDYFYPFA SEGPSAPCEG LDFHSAEEGA EESDSFGHPE FIWEHEDKTP EIKLVDVPTA IEGNGTGLLG DDGHQENLKN
301: GCGAESSAEE TTAIKLSKNL YAFDSYMNFL QFPYTEGSSN VSLDCLFGGE LAQDDFSTVN LWSFDDLPME GSVY
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.