Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P05800_001 | Banana | nucleus | 44.24 | 43.43 |
| GSMUA_Achr6P10870_001 | Banana | nucleus | 37.92 | 43.04 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 57.25 | 42.42 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 36.06 | 42.17 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 37.92 | 41.13 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 27.88 | 40.76 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 23.05 | 40.26 |
| GSMUA_Achr11P... | Banana | nucleus | 28.62 | 38.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.48 | 37.96 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 19.33 | 37.41 |
| KRH69017 | Soybean | nucleus | 47.96 | 37.39 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 44.61 | 36.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.81 | 35.83 |
| GSMUA_Achr10P... | Banana | nucleus | 37.92 | 35.54 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 42.38 | 34.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.0 | 33.33 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 46.1 | 32.29 |
| Solyc03g123500.2.1 | Tomato | nucleus | 44.61 | 31.09 |
| Solyc06g063070.2.1 | Tomato | nucleus | 42.01 | 30.38 |
| PGSC0003DMT400023609 | Potato | nucleus | 43.87 | 30.26 |
| PGSC0003DMT400012547 | Potato | nucleus | 41.26 | 29.84 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 20.07 | 27.41 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 18.59 | 25.25 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 21.93 | 23.98 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 20.07 | 23.38 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 19.33 | 22.13 |
| GSMUA_Achr10P... | Banana | nucleus | 18.22 | 21.59 |
| GSMUA_Achr11P... | Banana | nucleus | 20.45 | 21.48 |
| GSMUA_Achr10P... | Banana | nucleus | 21.56 | 19.73 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 18.59 | 18.87 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 18.96 | 18.35 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 19.7 | 18.21 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G31090_001 | EnsemblPlants:GSMUA_Achr10P31090_001 | EnsemblPlants:GSMUA_Achr10T31090_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RMY3 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002966A13 | SEG:seg |
Description
Putative Ethylene response factor [Source:GMGC_GENE;Acc:GSMUA_Achr10G31090_001]
Coordinates
chr10:+:33277988..33281297
Molecular Weight (calculated)
30740.0 Da
IEP (calculated)
7.295
GRAVY (calculated)
-0.783
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISNI IPAGPRSRRR TAGYQRPDPK NEFGKKDDDF EADFMQFEED EEADLFHFKP FAFDSRDKPV PLRPSVIDKP SSKSATKNRK NRYRGIRRRP
101: WGKWAAEIRD PCKGVRVWLG TFNTAEEAAR AYDAEARKIR GKKAKVNFPD AAFPRVRTLL TKLTAPETPR TEMPRTDKCF NYLNDPFQDF CSSFDFTEVE
201: PIIQSEELTY LENGGTKKQL NNIFFQQPYS DGSTDDLINN LLSGDFTQDM SNVDLWSFDG MAHMGGSVF
101: WGKWAAEIRD PCKGVRVWLG TFNTAEEAAR AYDAEARKIR GKKAKVNFPD AAFPRVRTLL TKLTAPETPR TEMPRTDKCF NYLNDPFQDF CSSFDFTEVE
201: PIIQSEELTY LENGGTKKQL NNIFFQQPYS DGSTDDLINN LLSGDFTQDM SNVDLWSFDG MAHMGGSVF
001: MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP FVFSSTHKHH ASASDGKKKQ SSRYKGIRRR PWGRWAAEIR DPIKGVRVWL
101: GTFNTAEEAA RAYDLEAKRI RGAKAKLNFP NESSGKRKAK AKTVQQVEEN HEADLDVAVV SSAPSSSCLD FLWEENNPDT LLIDTQWLED IIMGDANKKH
201: EPNDSEEANN VDASLLSEEL LAFENQTEYF SQMPFTEGNC DSSTSLSSLF DGGNDMGLWS
101: GTFNTAEEAA RAYDLEAKRI RGAKAKLNFP NESSGKRKAK AKTVQQVEEN HEADLDVAVV SSAPSSSCLD FLWEENNPDT LLIDTQWLED IIMGDANKKH
201: EPNDSEEANN VDASLLSEEL LAFENQTEYF SQMPFTEGNC DSSTSLSSLF DGGNDMGLWS
Arabidopsis Description
HRE1Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IDA7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.