Factsheet for GSMUA_Achr6P25680_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G43160.1	Thale cress	nucleus	32.9	39.58
GSMUA_Achr7P18930_001	Banana	nucleus	22.94	38.13
GSMUA_Achr6P18020_001	Banana	nucleus	36.8	32.08
GSMUA_Achr10P...	Banana	nucleus	30.3	30.84
GSMUA_Achr3P08170_001	Banana	nucleus	23.38	29.35
GSMUA_Achr6P02310_001	Banana	nucleus	25.11	29.29
GSMUA_Achr11P...	Banana	nucleus	24.24	28.14
GSMUA_Achr11P...	Banana	nucleus	29.87	26.95
GSMUA_Achr3P08180_001	Banana	nucleus	22.51	26.4
GSMUA_Achr2P21900_001	Banana	nucleus	17.32	25.97
GSMUA_Achr10P...	Banana	nucleus	32.9	25.85
GSMUA_Achr6P08140_001	Banana	nucleus	30.74	25.54
GSMUA_Achr3P06960_001	Banana	nucleus	25.97	25.53
GSMUA_AchrUn_...	Banana	nucleus	23.81	25.46
GSMUA_AchrUn_...	Banana	nucleus	24.24	23.93
GSMUA_Achr2P21430_001	Banana	nucleus, plastid	29.44	23.37
GSMUA_Achr6P10870_001	Banana	nucleus	23.81	23.21
GSMUA_Achr9P18090_001	Banana	nucleus	24.68	22.98
GSMUA_Achr8P22500_001	Banana	nucleus	23.81	22.36
GSMUA_Achr3P10140_001	Banana	nucleus	22.08	22.17
GSMUA_Achr10P...	Banana	nucleus	25.11	20.21
GSMUA_Achr10P...	Banana	nucleus	23.38	20.07
GSMUA_Achr3P05800_001	Banana	nucleus	23.38	19.71
GSMUA_Achr8P23730_001	Banana	nucleus	25.97	18.4
GSMUA_Achr2P07300_001	Banana	nucleus	23.81	16.67
GSMUA_Achr7P19800_001	Banana	nucleus	25.11	15.98
GSMUA_Achr5P24060_001	Banana	nucleus	25.54	15.36
GSMUA_AchrUn_...	Banana	nucleus	23.81	14.71

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr6G25680_001
EnsemblPlants:GSMUA_Achr6P25680_001	EnsemblPlants:GSMUA_Achr6T25680_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TA64	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171	TMHMM:TMhelix
UniParc:UPI000296C5A0	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G25680_001]

Coordinates

chr6:-:26729959..26733628

Molecular Weight (calculated)

25515.8 Da

IEP (calculated)

9.553

GRAVY (calculated)

-0.679

Length

231 amino acids

Sequence
(BLAST)

001: MAAIVSALRR VVAGDTAVDA PSFSPSRGGG RGGVIGYKRE PDELMGERAY KHHRAPAPVA EATPSATPLA EEGESRKYRG VRQRPWGKWA AEIRDPHKAA
101: RVWLGTFTTA EAAARAYDEA ALRFRGSRAK LNFPEDAPEH RPVTDSKSSM ASNCAGSSSS TDQHMGYLPQ ASWIESNQHR PSSENPALYW NFLLGKRKKK
201: KESEDEEINN LFVLIFFFLG GWGGCSDSYW K

Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)

001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY

Arabidopsis Description

ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.