Factsheet for GSMUA_Achr3P08170_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	61.96	52.78
GSMUA_Achr11P...	Banana	nucleus	56.52	52.26
KRG96472	Soybean	mitochondrion	48.91	40.72
GSMUA_AchrUn_...	Banana	nucleus	51.63	40.6
VIT_07s0005g00820.t01	Wine grape	nucleus	55.98	39.77
GSMUA_Achr2P21900_001	Banana	nucleus	32.61	38.96
Solyc09g075420.2.1	Tomato	nucleus	52.72	37.31
GSMUA_Achr7P18930_001	Banana	nucleus	26.63	35.25
PGSC0003DMT400081322	Potato	nucleus	52.17	34.53
GSMUA_Achr6P10870_001	Banana	nucleus	43.48	33.76
KRH69270	Soybean	nucleus	50.0	30.67
KRH31850	Soybean	nucleus	50.0	30.26
GSMUA_Achr3P10140_001	Banana	nucleus	37.5	30.0
GSMUA_Achr9P18090_001	Banana	nucleus	39.13	29.03
GSMUA_Achr3P05800_001	Banana	nucleus	42.93	28.83
GSMUA_Achr10P...	Banana	nucleus	44.02	28.22
GSMUA_Achr10P...	Banana	nucleus	40.76	27.88
GSMUA_Achr3P08180_001	Banana	nucleus	29.35	27.41
GSMUA_Achr8P23730_001	Banana	nucleus	45.11	25.46
GSMUA_Achr2P07300_001	Banana	nucleus	44.57	24.85
GSMUA_Achr6P02310_001	Banana	nucleus	25.54	23.74
GSMUA_Achr6P25680_001	Banana	nucleus	29.35	23.38
GSMUA_Achr8P22500_001	Banana	nucleus	30.98	23.17
GSMUA_Achr7P19800_001	Banana	nucleus	45.11	22.86
GSMUA_Achr3P06960_001	Banana	nucleus	28.8	22.55
GSMUA_AchrUn_...	Banana	nucleus	45.65	22.46
GSMUA_Achr5P24060_001	Banana	nucleus	46.74	22.4
GSMUA_Achr10P...	Banana	nucleus	27.17	22.03
GSMUA_Achr11P...	Banana	nucleus	27.72	19.92
GSMUA_Achr6P18020_001	Banana	nucleus	27.17	18.87
GSMUA_Achr6P08140_001	Banana	nucleus	27.72	18.35
GSMUA_Achr2P21430_001	Banana	nucleus, plastid	28.26	17.87
GSMUA_Achr10P...	Banana	nucleus	27.72	17.35

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G08170_001	EnsemblPlants:GSMUA_Achr3P08170_001	EnsemblPlants:GSMUA_Achr3T08170_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SCT4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF66	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296EDF5	SEG:seg

Description

Putative Ethylene-responsive transcription factor ERF071 [Source:GMGC_GENE;Acc:GSMUA_Achr3G08170_001]

Coordinates

chr3:-:5783641..5784280

Molecular Weight (calculated)

20789.7 Da

IEP (calculated)

9.469

GRAVY (calculated)

-0.677

Length

184 amino acids

Sequence
(BLAST)

001: MCGGAIISDL ISPRDNTHRP STSVFWPDCT DCHCIPPPLE KVQRKRERKN LYRGIRHRPW GKWAAEIRDP VKGVRVWLGT FATAEEAARA YDREARRIRG
101: KKAKVNFPND DPLPNPPRRR PAATVSSYEA RWLSDQPTTA AAHASYTMNL YEVPYMESVV PSTGPPGMEM LWSFDDVTPS SAPL

Best Arabidopsis Sequence Match ( AT2G47520.1 )
(BLAST)

001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N

Arabidopsis Description

ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.