Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P10870_001 | Banana | nucleus | 42.16 | 51.05 |
| GSMUA_Achr2P21900_001 | Banana | nucleus | 26.48 | 49.35 |
| GSMUA_Achr9P18090_001 | Banana | nucleus | 41.12 | 47.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.45 | 44.44 |
| GSMUA_Achr11P... | Banana | nucleus | 30.66 | 44.22 |
| GSMUA_Achr3P08170_001 | Banana | nucleus | 28.22 | 44.02 |
| GSMUA_Achr3P10140_001 | Banana | nucleus | 34.49 | 43.04 |
| GSMUA_Achr3P05800_001 | Banana | nucleus | 40.42 | 42.34 |
| GSMUA_Achr2P07300_001 | Banana | nucleus | 44.6 | 38.79 |
| GSMUA_Achr10P... | Banana | nucleus | 35.54 | 37.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.27 | 35.9 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 17.07 | 35.25 |
| GSMUA_Achr7P19800_001 | Banana | nucleus | 43.21 | 34.16 |
| GSMUA_Achr8P23730_001 | Banana | nucleus | 38.68 | 34.05 |
| GSMUA_Achr5P24060_001 | Banana | nucleus | 43.9 | 32.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.51 | 32.62 |
| KXG35689 | Sorghum | nucleus, plastid | 43.9 | 32.31 |
| Os09t0434500-01 | Rice | vacuole | 43.9 | 31.82 |
| TraesCS5A01G215900.1 | Wheat | nucleus | 40.77 | 31.03 |
| TraesCS5D01G223700.1 | Wheat | nucleus | 40.77 | 30.71 |
| TraesCS5B01G214400.1 | Wheat | nucleus | 40.77 | 30.31 |
| Os07t0617000-02 | Rice | nucleus | 35.19 | 29.53 |
| KXG36690 | Sorghum | nucleus | 32.75 | 29.38 |
| HORVU5Hr1G062940.1 | Barley | nucleus, plastid | 38.33 | 27.03 |
| Zm00001d020595_P001 | Maize | nucleus | 39.02 | 26.79 |
| Zm00001d005798_P001 | Maize | nucleus | 38.68 | 26.24 |
| GSMUA_Achr3P08180_001 | Banana | nucleus | 17.77 | 25.89 |
| GSMUA_Achr6P25680_001 | Banana | nucleus | 20.21 | 25.11 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 17.07 | 24.75 |
| GSMUA_Achr8P22500_001 | Banana | nucleus | 19.86 | 23.17 |
| EES13952 | Sorghum | nucleus | 28.92 | 22.37 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 18.12 | 22.13 |
| GSMUA_Achr10P... | Banana | nucleus | 17.07 | 21.59 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 19.86 | 21.51 |
| Zm00001d032095_P001 | Maize | nucleus | 28.22 | 21.32 |
| GSMUA_Achr11P... | Banana | nucleus | 17.77 | 19.92 |
| GSMUA_Achr10P... | Banana | nucleus | 19.16 | 18.71 |
| GSMUA_Achr6P08140_001 | Banana | nucleus | 17.07 | 17.63 |
| GSMUA_Achr2P21430_001 | Banana | nucleus, plastid | 16.72 | 16.49 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G18670_001 | EnsemblPlants:GSMUA_Achr10P18670_001 | EnsemblPlants:GSMUA_Achr10T18670_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RJE2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029555FD | SEG:seg |
Description
Putative AP2 domain class transcription factor [Source:GMGC_GENE;Acc:GSMUA_Achr10G18670_001]
Coordinates
chr10:-:25297890..25300087
Molecular Weight (calculated)
32163.0 Da
IEP (calculated)
6.930
GRAVY (calculated)
-0.570
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDF IPLATAASQR VMAEHLWPGL EKGKQTTRRR RRGVEVPDDD DDDDDFEADF QEFSDETQVD EFDAVHFGFG SEAPFPRDGS PKSVYLDGPA
101: IKSSKRKRKN RYIGIRQRPW GKWAAEIRDP NKGIRVWLGT FNTAEEAARA YDAEAHRLRG KNAKVNFPTG AASLSSRKRS SKPTASVIPK PKVLEKLDCN
201: QNSNYLFELS EELYANEPYM KFLPTPYFEG SSDASMDSLF GGADLWKQIN NTMLMKDFGG LETLASCHEV LVICRAKVPS RTLLVIL
101: IKSSKRKRKN RYIGIRQRPW GKWAAEIRDP NKGIRVWLGT FNTAEEAARA YDAEAHRLRG KNAKVNFPTG AASLSSRKRS SKPTASVIPK PKVLEKLDCN
201: QNSNYLFELS EELYANEPYM KFLPTPYFEG SSDASMDSLF GGADLWKQIN NTMLMKDFGG LETLASCHEV LVICRAKVPS RTLLVIL
001: MCGGAIISDF IPPPRSRRVT SEFIWPDLKK NLKGSKKSSK NRSNFFDFDA EFEADFQGFK DDSSIDCDDD FDVGDVFADV KPFVFTSTPK PAVSAAAEVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
101: GKKVTGLDGD AEKSANRKRK NQYRGIRQRP WGKWAAEIRD PREGARIWLG TFKTAEEAAR AYDAAARRIR GSKAKVNFPE ENMKANSQKR SVKANLQKPV
201: AKPNPNPSPA LVQNSNISFE NMCFMEEKHQ VSNNNNNQFG MTNSVDAGCN GYQYFSSDQG SNSFDCSEFG WSDQAPITPD ISSAVINNNN SALFFEEANP
301: AKKLKSMDFE TPYNNTEWDA SLDFLNEDAV TTQDNGANPM DLWSIDEIHS MIGGVF
Arabidopsis Description
RAP2-12Ethylene-responsive transcription factor RAP2-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.