Factsheet for VIT_07s0005g00820.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	45.95	59.8
GSMUA_AchrUn_...	Banana	nucleus	49.03	58.8
GSMUA_Achr3P08170_001	Banana	nucleus	39.77	55.98
KRG96472	Soybean	mitochondrion	43.24	50.68
Solyc09g075420.2.1	Tomato	nucleus	47.1	46.92
KRH31850	Soybean	nucleus	53.28	45.39
KRH69270	Soybean	nucleus	52.51	45.33
PGSC0003DMT400081322	Potato	nucleus	47.88	44.6
GSMUA_AchrUn_...	Banana	nucleus	37.84	41.88
VIT_09s0002g00470.t01	Wine grape	nucleus	46.33	31.66
VIT_05s0077g01860.t01	Wine grape	nucleus	30.89	30.89
VIT_07s0031g00710.t01	Wine grape	nucleus	18.15	25.27
VIT_07s0031g00720.t01	Wine grape	nucleus	20.46	24.65
VIT_01s0150g00120.t01	Wine grape	nucleus, plastid	20.85	22.78
VIT_17s0000g00200.t01	Wine grape	nucleus	21.24	22.36
VIT_03s0063g00460.t01	Wine grape	nucleus	18.92	19.84
VIT_14s0068g01040.t01	Wine grape	nucleus	21.62	17.39
VIT_07s0031g01980.t01	Wine grape	nucleus	23.55	17.33
VIT_18s0072g00260.t01	Wine grape	nucleus	24.32	13.32

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:CBI36892	ProteinID:CBI36892.3
ncoils:Coil	UniProt:D7U2C6	InterPro:DNA-bd_dom_sf	EMBL:FN596502	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF77	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0001BE4B46
ArrayExpress:VIT_07s0005g00820	EnsemblPlantsGene:VIT_07s0005g00820	EnsemblPlants:VIT_07s0005g00820.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:3447132..3448343

Molecular Weight (calculated)

29173.1 Da

IEP (calculated)

7.920

GRAVY (calculated)

-0.847

Length

259 amino acids

Sequence
(BLAST)

001: MCGGAIISDF IPRNRNRRDP APDLWPDSFF AKPDGCEYDL GRFSQKGLPN LKRSQPILDD EPEVKPAKRV RKNLYRGIRQ RPWGKWAAEI RDPSKGVRVW
101: LGTFNTAEEA ARAYDREARK IRGKKAKVNF PNEDDDYTEN HQNHRALPTR WNSNPSISFP SNGFNTKACV GKVKNQKENQ TETVTEAEKE EMEVQKLSEE
201: LMAYESVMKF YQIPYLDGNS AAVPNAAQEN AGACGGAAME ALWSFDEFAV APQPTSAAL

Best Arabidopsis Sequence Match ( AT2G47520.1 )
(BLAST)

001: MCGGAIISDF IWSKSESEPS QLGSVSSRKK RKPVSVSEER DGKRERKNLY RGIRQRPWGK WAAEIRDPSK GVRVWLGTFK TADEAARAYD VAAIKIRGRK
101: AKLNFPNTQV EEEADTKPGG NQNELISENQ VESLSEDLMA LEDYMRFYQI PVADDQSATD IGNLWSYQDS N

Arabidopsis Description

ERF071Ethylene-responsive transcription factor ERF071 [Source:UniProtKB/Swiss-Prot;Acc:O22259]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.