Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P25680_001 | Banana | nucleus | 39.58 | 32.9 |
| AT5G13330.1 | Thale cress | nucleus | 34.38 | 31.13 |
| AT5G50080.2 | Thale cress | nucleus | 36.46 | 30.57 |
| AT2G47520.1 | Thale cress | nucleus | 26.56 | 29.82 |
| AT5G07310.1 | Thale cress | nucleus | 36.46 | 26.62 |
| AT5G61890.1 | Thale cress | nucleus | 34.38 | 26.61 |
| AT2G33710.2 | Thale cress | nucleus | 30.21 | 25.11 |
| AT4G34410.1 | Thale cress | nucleus | 31.25 | 22.39 |
| AT1G72360.2 | Thale cress | nucleus | 27.6 | 20.23 |
| AT3G16770.1 | Thale cress | nucleus | 26.04 | 20.16 |
| AT5G64750.1 | Thale cress | nucleus | 39.06 | 19.18 |
| AT1G53910.1 | Thale cress | nucleus | 31.77 | 17.04 |
| AT3G14230.1 | Thale cress | nucleus | 32.29 | 16.36 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:840915 | ProteinID:AAC36019.1 | ProteinID:AEE31950.1 | EMBL:AF003099 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G43160 | EnsemblPlantsGene:AT1G43160 | RefSeq:AT1G43160 | TAIR:AT1G43160 |
| RefSeq:AT1G43160-TAIR-G | EnsemblPlants:AT1G43160.1 | TAIR:AT1G43160.1 | EMBL:AY062847 | EMBL:AY114582 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0006970 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009414 | GO:GO:0009611 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009658 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009751 | GO:GO:0009753 |
| GO:GO:0009873 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0034605 | GO:GO:0045893 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_175008.1 | PFAM:PF00847 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009046 | PO:PO:0020137 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | UniProt:Q7G1L2 | Symbol:RAP2.6 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00000A9F00 | SEG:seg | : | : | : | : |
Description
RAP2-6Ethylene-responsive transcription factor RAP2-6 [Source:UniProtKB/Swiss-Prot;Acc:Q7G1L2]
Coordinates
chr1:+:16263805..16264945
Molecular Weight (calculated)
21963.8 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.735
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSMLTNVVS GETEPSASAT WTMGHKRERE EFSLPPQPLI TGSAVTKECE SSMSLERPKK YRGVRQRPWG KWAAEIRDPH KATRVWLGTF ETAEAAARAY
101: DAAALRFRGS KAKLNFPENV GTQTIQRNSH FLQNSMQPSL TYIDQCPTLL SYSRCMEQQQ PLVGMLQPTE EENHFFEKPW TEYDQYNYSS FG
101: DAAALRFRGS KAKLNFPENV GTQTIQRNSH FLQNSMQPSL TYIDQCPTLL SYSRCMEQQQ PLVGMLQPTE EENHFFEKPW TEYDQYNYSS FG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.