Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021543.1-P | Field mustard | nucleus | 89.56 | 93.97 |
| CDY39107 | Canola | nucleus | 95.3 | 93.59 |
| AT3G14230.1 | Thale cress | nucleus | 76.5 | 77.31 |
| CDX98435 | Canola | nucleus | 75.2 | 75.99 |
| CDX75756 | Canola | nucleus | 68.41 | 75.29 |
| CDX82492 | Canola | nucleus | 67.89 | 73.86 |
| CDX97559 | Canola | nucleus | 77.55 | 69.56 |
| CDY25681 | Canola | nucleus | 50.65 | 63.19 |
| CDY02492 | Canola | nucleus | 50.39 | 63.07 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 23.24 | 44.95 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 23.24 | 43.63 |
| CDY27480 | Canola | nucleus | 21.67 | 43.01 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 23.5 | 42.86 |
| CDY51428 | Canola | nucleus | 21.93 | 42.86 |
| Os01t0313300-01 | Rice | nucleus | 22.72 | 42.03 |
| CDX72909 | Canola | nucleus | 20.1 | 40.96 |
| CDX68269 | Canola | nucleus | 22.45 | 38.91 |
| EES00666 | Sorghum | nucleus | 22.98 | 38.77 |
| Zm00001d009103_P001 | Maize | nucleus | 22.72 | 37.83 |
| Zm00001d040651_P001 | Maize | nucleus | 23.24 | 37.55 |
| CDY50643 | Canola | nucleus | 21.41 | 36.12 |
| CDX96402 | Canola | nucleus | 22.98 | 35.2 |
| CDY34977 | Canola | nucleus | 21.67 | 34.44 |
| CDY28337 | Canola | nucleus | 21.67 | 34.16 |
| CDX92094 | Canola | nucleus | 21.41 | 33.88 |
| CDX95906 | Canola | nucleus | 21.41 | 33.61 |
| CDY54628 | Canola | nucleus | 21.41 | 33.47 |
| CDY37698 | Canola | mitochondrion | 14.62 | 33.14 |
| CDX82392 | Canola | nucleus | 21.15 | 33.06 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 23.5 | 30.1 |
| CDY53788 | Canola | golgi | 14.88 | 29.08 |
| CDY17191 | Canola | nucleus | 15.14 | 26.85 |
| CDY27952 | Canola | nucleus | 15.14 | 26.85 |
| Zm00001d007033_P001 | Maize | plastid | 18.02 | 24.3 |
| CDX69647 | Canola | nucleus | 13.32 | 23.5 |
| CDY14051 | Canola | nucleus | 15.67 | 23.44 |
| CDX70027 | Canola | nucleus | 15.4 | 23.32 |
| CDX98982 | Canola | nucleus | 15.4 | 23.32 |
| CDY55173 | Canola | nucleus | 15.4 | 23.14 |
| CDY53152 | Canola | nucleus | 13.58 | 23.01 |
| CDY09787 | Canola | nucleus | 13.32 | 22.87 |
| CDX78288 | Canola | nucleus | 15.14 | 22.75 |
| CDX78517 | Canola | nucleus | 14.62 | 21.71 |
| CDX70498 | Canola | nucleus | 14.62 | 21.71 |
| CDX85656 | Canola | nucleus | 14.1 | 21.69 |
| CDX91131 | Canola | nucleus | 14.1 | 21.26 |
| CDY31304 | Canola | nucleus | 20.63 | 20.73 |
| CDY46821 | Canola | nucleus | 20.37 | 20.42 |
| CDY14506 | Canola | nucleus | 20.63 | 20.15 |
| CDX76278 | Canola | nucleus | 13.84 | 20.0 |
| CDY45310 | Canola | nucleus | 13.58 | 19.92 |
| CDX75430 | Canola | nucleus | 13.58 | 19.85 |
| CDY08853 | Canola | nucleus | 20.37 | 19.75 |
| CDY46253 | Canola | nucleus | 13.32 | 19.54 |
| CDX72481 | Canola | nucleus | 13.05 | 19.38 |
| CDX69054 | Canola | nucleus | 13.32 | 19.32 |
| CDX81250 | Canola | nucleus | 19.06 | 18.11 |
| CDX69056 | Canola | nucleus | 8.88 | 16.67 |
| CDY71587 | Canola | cytosol | 0.52 | 2.9 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JF83 | UniProt:A0A078JF83 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY65334 | ProteinID:CDY65334 | ProteinID:CDY65334.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00045638001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEDC94 | SEG:seg | : | : | : | : |
Description
BnaAnng20420DBnaAnng20420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF83]
Coordinates
chrLK034744:+:5838..8234
Molecular Weight (calculated)
42874.8 Da
IEP (calculated)
4.853
GRAVY (calculated)
-0.686
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDF IPPPSFRRVT SEFLWPDLKK SKGKASKKRS DFFDLDDEFE ADFQGFEDDD ASFDCEDDDD DVFAKVKPFV FTATTKPLAS PPTGSVSGKK
101: IIESGGQAEK SAKRKRKNQY RGIRQRPWGK WAAEIRDPRK GSREWLGTFD TAEEAARAYD AAARRIRGSK AKVNFPEESN NNRSVSQKRP SAKKLVAKPN
201: QSPALVQQPM SQYCNNSFGD VSFVEEKPQM YNNQFGLANS YNNHYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN QAPFIEVTNA AKKLKPSSDD
301: LMAYLDNALW ESPSPLEVEA MLGVDAAAVT QGEENPMDLW SLDDINYMLE GDFAVEGGMV QVTTWSLLHR FYLIYESLLN SLK
101: IIESGGQAEK SAKRKRKNQY RGIRQRPWGK WAAEIRDPRK GSREWLGTFD TAEEAARAYD AAARRIRGSK AKVNFPEESN NNRSVSQKRP SAKKLVAKPN
201: QSPALVQQPM SQYCNNSFGD VSFVEEKPQM YNNQFGLANS YNNHYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN QAPFIEVTNA AKKLKPSSDD
301: LMAYLDNALW ESPSPLEVEA MLGVDAAAVT QGEENPMDLW SLDDINYMLE GDFAVEGGMV QVTTWSLLHR FYLIYESLLN SLK
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.