Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017656.1-P | Field mustard | nucleus | 98.85 | 95.56 |
| CDX72481 | Canola | nucleus | 93.1 | 94.19 |
| AT4G34410.1 | Thale cress | nucleus | 81.61 | 79.48 |
| CDX75430 | Canola | nucleus | 76.63 | 76.34 |
| CDY46253 | Canola | nucleus | 76.25 | 76.25 |
| CDX69054 | Canola | nucleus | 76.25 | 75.38 |
| CDX76278 | Canola | nucleus | 76.25 | 75.09 |
| CDX69056 | Canola | nucleus | 55.17 | 70.59 |
| PGSC0003DMT400021311 | Potato | nucleus | 29.5 | 49.68 |
| PGSC0003DMT400021312 | Potato | nucleus, plastid | 27.59 | 46.75 |
| GSMUA_Achr7P18930_001 | Banana | nucleus | 22.61 | 42.45 |
| KRH50274 | Soybean | nucleus | 37.16 | 42.17 |
| Solyc10g050970.1.1 | Tomato | nucleus | 35.63 | 41.7 |
| VIT_03s0063g00460.t01 | Wine grape | nucleus | 38.7 | 40.89 |
| KRH71142 | Soybean | nucleus | 32.95 | 40.0 |
| GSMUA_Achr3P06960_001 | Banana | nucleus | 36.02 | 40.0 |
| GSMUA_Achr6P02310_001 | Banana | nucleus | 29.12 | 38.38 |
| TraesCS5B01G236900.1 | Wheat | nucleus | 34.48 | 37.19 |
| TraesCS1B01G389700.1 | Wheat | nucleus | 34.87 | 36.26 |
| TraesCS5A01G238400.1 | Wheat | nucleus | 33.33 | 36.1 |
| TraesCS5D01G245300.1 | Wheat | nucleus | 33.72 | 35.77 |
| Solyc01g108240.2.1 | Tomato | nucleus | 39.85 | 35.25 |
| TraesCS1D01G376800.1 | Wheat | nucleus | 36.02 | 35.21 |
| TraesCS1A01G370600.1 | Wheat | nucleus | 34.48 | 35.16 |
| TraesCS1B01G389800.1 | Wheat | nucleus | 34.87 | 35.14 |
| PGSC0003DMT400066343 | Potato | nucleus | 39.46 | 34.92 |
| TraesCS1A01G370700.1 | Wheat | nucleus | 35.25 | 34.72 |
| TraesCS1B01G389900.1 | Wheat | nucleus | 35.25 | 34.46 |
| TraesCS1D01G376600.1 | Wheat | nucleus | 34.87 | 34.34 |
| TraesCS1A01G370400.1 | Wheat | nucleus | 33.72 | 33.85 |
| Zm00001d031796_P001 | Maize | nucleus | 34.87 | 33.83 |
| HORVU1Hr1G082310.1 | Barley | nucleus | 34.1 | 33.71 |
| HORVU5Hr1G068450.1 | Barley | nucleus | 34.48 | 33.58 |
| TraesCS1D01G376700.1 | Wheat | nucleus | 33.72 | 33.08 |
| Os09t0457900-01 | Rice | nucleus | 34.48 | 32.85 |
| Os08t0474000-01 | Rice | nucleus | 26.82 | 31.96 |
| Zm00001d005892_P001 | Maize | nucleus | 32.18 | 31.94 |
| TraesCS1D01G376500.1 | Wheat | nucleus | 32.57 | 31.37 |
| CDY37698 | Canola | mitochondrion | 20.31 | 31.36 |
| OQU80635 | Sorghum | nucleus | 34.87 | 31.16 |
| EER96855 | Sorghum | mitochondrion, nucleus | 34.87 | 30.95 |
| CDY27480 | Canola | nucleus | 21.07 | 28.5 |
| CDY51428 | Canola | nucleus | 20.69 | 27.55 |
| CDY17191 | Canola | nucleus | 22.61 | 27.31 |
| CDY53788 | Canola | golgi | 20.31 | 27.04 |
| CDY27952 | Canola | nucleus | 22.22 | 26.85 |
| CDY09787 | Canola | nucleus | 22.22 | 26.01 |
| CDX69647 | Canola | nucleus | 21.46 | 25.81 |
| CDY53152 | Canola | nucleus | 21.46 | 24.78 |
| CDY34977 | Canola | nucleus | 22.22 | 24.07 |
| CDX78517 | Canola | nucleus | 23.75 | 24.03 |
| CDX95906 | Canola | nucleus | 22.22 | 23.77 |
| CDX70498 | Canola | nucleus | 23.37 | 23.64 |
| CDY28337 | Canola | nucleus | 21.84 | 23.46 |
| CDX72909 | Canola | nucleus | 16.86 | 23.4 |
| CDX92094 | Canola | nucleus | 21.46 | 23.14 |
| CDX78288 | Canola | nucleus | 22.22 | 22.75 |
| CDY14051 | Canola | nucleus | 22.22 | 22.66 |
| CDX98982 | Canola | nucleus | 21.84 | 22.53 |
| CDX70027 | Canola | nucleus | 21.84 | 22.53 |
| CDX85656 | Canola | nucleus | 21.46 | 22.49 |
| CDY54628 | Canola | nucleus | 21.07 | 22.45 |
| CDX82392 | Canola | nucleus | 21.07 | 22.45 |
| CDX91131 | Canola | nucleus | 21.84 | 22.44 |
| CDX68269 | Canola | nucleus | 18.77 | 22.17 |
| CDY55173 | Canola | nucleus | 21.46 | 21.96 |
| CDY50643 | Canola | nucleus | 18.39 | 21.15 |
| CDY31304 | Canola | nucleus | 26.82 | 18.37 |
| CDY46821 | Canola | nucleus | 26.82 | 18.32 |
| CDX96402 | Canola | nucleus | 16.86 | 17.6 |
| CDY14506 | Canola | nucleus | 26.05 | 17.35 |
| CDY08853 | Canola | nucleus | 26.05 | 17.22 |
| CDX81250 | Canola | nucleus | 26.05 | 16.87 |
| CDX75756 | Canola | nucleus | 20.31 | 15.23 |
| CDX82492 | Canola | nucleus | 20.31 | 15.06 |
| CDY02492 | Canola | nucleus | 16.48 | 14.05 |
| CDX98435 | Canola | nucleus | 19.92 | 13.72 |
| CDY25681 | Canola | nucleus | 16.09 | 13.68 |
| CDY39107 | Canola | nucleus | 20.31 | 13.59 |
| CDY65334 | Canola | nucleus | 19.92 | 13.58 |
| CDX97559 | Canola | nucleus | 20.31 | 12.41 |
| CDY71587 | Canola | cytosol | 2.68 | 10.14 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078I362 | UniProt:A0A078I362 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY45310 | ProteinID:CDY45310 | ProteinID:CDY45310.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00081763001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF62 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EDB0C5 | SEG:seg | : | : | : | : |
Description
BnaA03g52830DBnaA03g52830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I362]
Coordinates
chrLK032620:+:59500..60312
Molecular Weight (calculated)
28793.4 Da
IEP (calculated)
6.295
GRAVY (calculated)
-0.693
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYPNNIRPE FVGAPASERD STRNRYQQKE QLSPEQELSV IVSALQHVLS GEKETTPYQG FSSNSTVISA GMHSDTCQVC RIDGCLGCNY FFAPNQRIEK
101: KQQVEVEEGS TVVAAAATGK IRKRKNKKNG YRGVRQRPWG KFAAEIRDPK RATRVWLGTF ETAEDAARAY DRAAIGFRGP RAKLNFPFVD YTSATTSSSV
201: PAEDTRTNAS ASVSAVDSVE AEQWRGGEGG DCDMEEYLKM VMDFGNGDSS DSGNTIADMF Q
101: KQQVEVEEGS TVVAAAATGK IRKRKNKKNG YRGVRQRPWG KFAAEIRDPK RATRVWLGTF ETAEDAARAY DRAAIGFRGP RAKLNFPFVD YTSATTSSSV
201: PAEDTRTNAS ASVSAVDSVE AEQWRGGEGG DCDMEEYLKM VMDFGNGDSS DSGNTIADMF Q
001: MHYPNNRTEF VGAPAPTRYQ KEQLSPEQEL SVIVSALQHV ISGENETAPC QGFSSDSTVI SAGMPRLDSD TCQVCRIEGC LGCNYFFAPN QRIEKNHQQE
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
101: EEITSSSNRR RESSPVAKKA EGGGKIRKRK NKKNGYRGVR QRPWGKFAAE IRDPKRATRV WLGTFETAED AARAYDRAAI GFRGPRAKLN FPFVDYTSSV
201: SSPVAADDIG AKASASASVS ATDSVEAEQW NGGGGDCNME EWMNMMMMMD FGNGDSSDSG NTIADMFQ
Arabidopsis Description
ERF109Ethylene-responsive transcription factor ERF109 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ06]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.