Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37698 | Canola | mitochondrion | 83.16 | 96.45 |
| Bra021871.1-P | Field mustard | nucleus | 80.1 | 72.69 |
| CDY27952 | Canola | nucleus | 63.27 | 57.41 |
| CDY17191 | Canola | nucleus | 62.24 | 56.48 |
| AT2G33710.2 | Thale cress | nucleus | 61.73 | 52.38 |
| CDY09787 | Canola | nucleus | 34.69 | 30.49 |
| CDX69647 | Canola | nucleus | 32.65 | 29.49 |
| CDY27480 | Canola | nucleus | 28.06 | 28.5 |
| CDY51428 | Canola | nucleus | 28.06 | 28.06 |
| CDY53152 | Canola | nucleus | 31.12 | 26.99 |
| CDX98982 | Canola | nucleus | 33.67 | 26.09 |
| CDX70027 | Canola | nucleus | 33.67 | 26.09 |
| CDY14051 | Canola | nucleus | 33.16 | 25.39 |
| CDX85656 | Canola | nucleus | 32.14 | 25.3 |
| CDX72909 | Canola | nucleus | 23.98 | 25.0 |
| CDX78517 | Canola | nucleus | 32.65 | 24.81 |
| CDX70498 | Canola | nucleus | 32.65 | 24.81 |
| CDY55173 | Canola | nucleus | 32.14 | 24.71 |
| CDX91131 | Canola | nucleus | 31.63 | 24.41 |
| CDX78288 | Canola | nucleus | 31.12 | 23.92 |
| CDY34977 | Canola | nucleus | 27.04 | 21.99 |
| CDX95906 | Canola | nucleus | 27.04 | 21.72 |
| CDX92094 | Canola | nucleus | 26.53 | 21.49 |
| CDY28337 | Canola | nucleus | 26.53 | 21.4 |
| CDX68269 | Canola | nucleus | 23.98 | 21.27 |
| CDX82392 | Canola | nucleus | 26.53 | 21.22 |
| CDY54628 | Canola | nucleus | 26.53 | 21.22 |
| CDY50643 | Canola | nucleus | 23.98 | 20.7 |
| CDY46253 | Canola | nucleus | 27.55 | 20.69 |
| CDX72481 | Canola | nucleus | 27.04 | 20.54 |
| CDX76278 | Canola | nucleus | 27.55 | 20.38 |
| CDY45310 | Canola | nucleus | 27.04 | 20.31 |
| CDX69054 | Canola | nucleus | 27.04 | 20.08 |
| CDX75430 | Canola | nucleus | 26.53 | 19.85 |
| CDX69056 | Canola | nucleus | 19.9 | 19.12 |
| CDX96402 | Canola | nucleus | 23.98 | 18.8 |
| CDY31304 | Canola | nucleus | 31.63 | 16.27 |
| CDY46821 | Canola | nucleus | 31.63 | 16.23 |
| CDX75756 | Canola | nucleus | 28.06 | 15.8 |
| CDX81250 | Canola | nucleus | 32.14 | 15.63 |
| CDX82492 | Canola | nucleus | 28.06 | 15.62 |
| CDY14506 | Canola | nucleus | 30.61 | 15.31 |
| CDY08853 | Canola | nucleus | 30.61 | 15.19 |
| CDY65334 | Canola | nucleus | 29.08 | 14.88 |
| CDX98435 | Canola | nucleus | 28.57 | 14.78 |
| CDY02492 | Canola | nucleus | 22.96 | 14.71 |
| CDY39107 | Canola | nucleus | 29.08 | 14.62 |
| CDY25681 | Canola | nucleus | 22.45 | 14.33 |
| CDX97559 | Canola | nucleus | 28.57 | 13.11 |
| CDY71587 | Canola | cytosol | 0.51 | 1.45 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078IXN6 | UniProt:A0A078IXN6 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY53788 | ProteinID:CDY53788 | ProteinID:CDY53788.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00011449001 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 |
| SMART:SM00380 | SUPFAM:SSF54171 | TMHMM:TMhelix | UniParc:UPI0004EF411C | SEG:seg | : |
Description
BnaC04g44080DBnaC04g44080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXN6]
Coordinates
chrLK033237:+:47099..48250
Molecular Weight (calculated)
22338.9 Da
IEP (calculated)
10.317
GRAVY (calculated)
-0.306
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLIKWIIHI LNISLVFASF LFTVYILAHF IRTQCIFMNI PEQRKSRQRN YRGVRQRPWG KYAAEIRDPN KAARVWLGTF NTAEEAALAY DKAAFEFRGH
101: KAKLNFPEHI LINSTHRYPS TATSHDPIIV TPVPPVAPDI LLDQYGKYLS ENSYSSAANL SMTISASSSS LSQQGNIPKL EDSESVKNMS IHKRRK
101: KAKLNFPEHI LINSTHRYPS TATSHDPIIV TPVPPVAPDI LLDQYGKYLS ENSYSSAANL SMTISASSSS LSQQGNIPKL EDSESVKNMS IHKRRK
001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.