Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55173 | Canola | nucleus | 94.14 | 94.51 |
| CDX98982 | Canola | nucleus | 81.25 | 82.21 |
| CDX70027 | Canola | nucleus | 81.25 | 82.21 |
| CDX78288 | Canola | nucleus | 81.25 | 81.57 |
| AT5G07310.1 | Thale cress | nucleus | 82.81 | 80.61 |
| CDY53152 | Canola | nucleus | 56.25 | 63.72 |
| CDY71587 | Canola | cytosol | 14.06 | 52.17 |
| Solyc03g118190.2.1 | Tomato | nucleus | 40.62 | 42.62 |
| KRH54084 | Soybean | nucleus | 41.02 | 39.03 |
| KRH63879 | Soybean | nucleus | 39.84 | 38.93 |
| KRH63877 | Soybean | nucleus | 30.47 | 38.81 |
| CDY37698 | Canola | mitochondrion | 25.39 | 38.46 |
| PGSC0003DMT400036934 | Potato | nucleus | 41.41 | 38.41 |
| VIT_17s0000g00200.t01 | Wine grape | nucleus | 35.55 | 36.99 |
| CDX85656 | Canola | nucleus | 35.94 | 36.95 |
| CDX69647 | Canola | nucleus | 31.25 | 36.87 |
| CDX91131 | Canola | nucleus | 35.94 | 36.22 |
| CDX70498 | Canola | nucleus | 36.33 | 36.05 |
| CDY09787 | Canola | nucleus | 30.86 | 35.43 |
| CDX78517 | Canola | nucleus | 35.55 | 35.27 |
| GSMUA_Achr11P... | Banana | nucleus | 35.16 | 35.16 |
| CDY17191 | Canola | nucleus | 29.3 | 34.72 |
| CDY27952 | Canola | nucleus | 28.91 | 34.26 |
| CDY53788 | Canola | golgi | 25.39 | 33.16 |
| CDY51428 | Canola | nucleus | 21.48 | 28.06 |
| CDY27480 | Canola | nucleus | 21.09 | 27.98 |
| CDX72909 | Canola | nucleus | 18.75 | 25.53 |
| CDX72481 | Canola | nucleus | 23.05 | 22.87 |
| CDX75430 | Canola | nucleus | 23.05 | 22.52 |
| CDX69054 | Canola | nucleus | 23.05 | 22.35 |
| CDY46253 | Canola | nucleus | 22.66 | 22.22 |
| CDY45310 | Canola | nucleus | 22.66 | 22.22 |
| CDX68269 | Canola | nucleus | 19.14 | 22.17 |
| CDY34977 | Canola | nucleus | 20.7 | 21.99 |
| CDX92094 | Canola | nucleus | 20.7 | 21.9 |
| CDX76278 | Canola | nucleus | 22.66 | 21.89 |
| CDY28337 | Canola | nucleus | 20.7 | 21.81 |
| CDX95906 | Canola | nucleus | 20.7 | 21.72 |
| CDY14506 | Canola | nucleus | 33.2 | 21.68 |
| CDY50643 | Canola | nucleus | 19.14 | 21.59 |
| CDY08853 | Canola | nucleus | 33.2 | 21.52 |
| CDY46821 | Canola | nucleus | 32.03 | 21.47 |
| CDY31304 | Canola | nucleus | 31.64 | 21.26 |
| CDX82392 | Canola | nucleus | 20.31 | 21.22 |
| CDY54628 | Canola | nucleus | 20.31 | 21.22 |
| CDX69056 | Canola | nucleus | 16.41 | 20.59 |
| CDX81250 | Canola | nucleus | 31.64 | 20.1 |
| CDX96402 | Canola | nucleus | 19.53 | 20.0 |
| CDX75756 | Canola | nucleus | 23.44 | 17.24 |
| CDX82492 | Canola | nucleus | 23.05 | 16.76 |
| CDY02492 | Canola | nucleus | 19.92 | 16.67 |
| CDY25681 | Canola | nucleus | 19.53 | 16.29 |
| CDY65334 | Canola | nucleus | 23.44 | 15.67 |
| CDX98435 | Canola | nucleus | 23.05 | 15.57 |
| CDY39107 | Canola | nucleus | 23.44 | 15.38 |
| CDX97559 | Canola | nucleus | 23.44 | 14.05 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FLX3 | UniProt:A0A078FLX3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY14051 | ProteinID:CDY14051 | ProteinID:CDY14051.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00078579001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEDF63 | SEG:seg | : | : | : | : |
Description
BnaC02g01680DBnaC02g01680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLX3]
Coordinates
chrLK032040:-:153976..154864
Molecular Weight (calculated)
28896.6 Da
IEP (calculated)
6.403
GRAVY (calculated)
-1.150
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MANQRNYGKR PSRAGESEKK ETEDEENIFP FFSDRSQYDT RAMVSALTQV IGNQSSSTHD DNQHHPDEYN QQDSTQPISP KQDQGDLRKR HYRGVRQRPW
101: GKWAAEIRDP QKAARVWLGT FETAEAAAIA YDEAALKFKG SKAKLNFPER AQLASNSNST ITGLPDYNSS NHQLYYSNPQ TIPYDNQYYY NQYLQQGGNS
201: NDALTYSMAG GETGGLMYNH QTLSTTTSSS SGGSSRQQED YTRFLHFGDS SPYSGF
101: GKWAAEIRDP QKAARVWLGT FETAEAAAIA YDEAALKFKG SKAKLNFPER AQLASNSNST ITGLPDYNSS NHQLYYSNPQ TIPYDNQYYY NQYLQQGGNS
201: NDALTYSMAG GETGGLMYNH QTLSTTTSSS SGGSSRQQED YTRFLHFGDS SPYSGF
001: MANSGNYGKR PFRGDESDEK KEADDDENIF PFFSARSQYD MRAMVSALTQ VIGNQSSSHD NNQHQPVVYN QQDPNPPAPP TQDQGLLRKR HYRGVRQRPW
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF
Arabidopsis Description
ERF115Ethylene-responsive transcription factor ERF115 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.