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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400036934 Potato nucleus 87.3 77.17
Solyc12g042210.1.1 Tomato nucleus 58.61 49.83
Bra019622.1-P Field mustard nucleus 41.39 44.49
Solyc06g068830.1.1 Tomato nucleus 51.64 43.6
AT5G61890.1 Thale cress nucleus 43.85 43.15
CDY53152 Canola nucleus 39.75 42.92
CDX70027 Canola nucleus 43.44 41.9
CDX98982 Canola nucleus 43.44 41.9
Bra009272.1-P Field mustard nucleus 43.44 41.9
VIT_17s0000g00200.t01 Wine grape nucleus 41.39 41.06
CDY14051 Canola nucleus 42.62 40.62
KRH63879 Soybean nucleus 43.44 40.46
Bra028703.1-P Field mustard nucleus 42.21 40.39
CDY55173 Canola nucleus 42.21 40.39
AT5G07310.1 Thale cress nucleus 43.44 40.3
Bra029302.1-P Field mustard nucleus 41.8 40.16
CDX78288 Canola nucleus 41.8 40.0
Bra005932.1-P Field mustard nucleus 41.8 40.0
KRH63877 Soybean nucleus 32.38 39.3
KRH54084 Soybean nucleus 43.03 39.03
CDY71587 Canola cytosol 9.84 34.78
Solyc02g090800.1.1 Tomato nucleus 17.62 32.82
Solyc02g090770.1.1 Tomato nucleus 23.36 28.08
Solyc10g050970.1.1 Tomato nucleus 22.13 24.22
Solyc12g056590.1.1 Tomato nucleus 30.74 24.19
Solyc02g090790.1.1 Tomato nucleus 22.13 23.79
Solyc04g051360.2.1 Tomato nucleus 29.51 23.76
Solyc09g075420.2.1 Tomato nucleus 22.54 21.15
Solyc01g065980.2.1 Tomato nucleus 21.72 20.87
Solyc01g108240.2.1 Tomato nucleus 22.95 18.98
Solyc04g012050.2.1 Tomato nucleus 28.69 17.59
Solyc04g071770.2.1 Tomato nucleus 31.56 17.04
Solyc06g063070.2.1 Tomato nucleus 22.13 14.52
Solyc03g123500.2.1 Tomato nucleus 22.13 13.99
Solyc12g049560.1.1 Tomato nucleus 20.9 13.21
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sfGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001471InterPro:IPR036955UniProt:K4BLX0
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190PANTHER:PTHR31190:SF41SMART:SM00380
SUPFAM:SSF54171EnsemblPlantsGene:Solyc03g118190.2EnsemblPlants:Solyc03g118190.2.1UniParc:UPI0002767A61SEG:seg:
Description
No Description!
Coordinates
chr3:-:67133219..67134559
Molecular Weight (calculated)
27598.3 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.949
Length
244 amino acids
Sequence
(BLAST)
001: MKRSSSNNDQ RDEKDTSNIF PIYSSARSQH DMSAMVSALS QVIGNSSSSA SGDSSSVHVN PLTLIQQHQS QSSTQDQERR RYRGVRQRPW GKWAAEIRDP
101: KKAARVWLGT FETAEGAALA YDEAALRFKG NKAKLNFPER VQGQFFQCYD QPATSSNNTS EQNYPNVHHY ADLLLRTDNN IDLNFDVSPN TFYHSFDISQ
201: SSMEVPVYHE EQQQVITTHE EEEEDFVKYR GSHFGNSTSS GGTK
Best Arabidopsis Sequence Match ( AT5G61890.1 )
(BLAST)
001: MYGKRPFGGD ESEEREEDEN LFPVFSARSQ HDMRVMVSAL TQVIGNQQSK SHDNISSIDD NYPSVYNPQD PNQQVAPTHQ DQGDLRRRHY RGVRQRPWGK
101: WAAEIRDPKK AARVWLGTFE TAESAALAYD EAALKFKGSK AKLNFPERVQ LGSNSTYYSS NQIPQMEPQS IPNYNQYYHD ASSGDMLSFN LGGGYGSGTG
201: YSMSHDNSTT TAATTSSSSG GSSRQQEEQD YARFWRFGDS SSSPHSGY
Arabidopsis Description
ERF114Ethylene-responsive transcription factor ERF114 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH54]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.