Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009272.1-P | Field mustard | nucleus | 98.42 | 98.42 |
| CDX70027 | Canola | nucleus | 98.42 | 98.42 |
| CDX78288 | Canola | nucleus | 86.56 | 85.88 |
| CDY14051 | Canola | nucleus | 82.21 | 81.25 |
| CDY55173 | Canola | nucleus | 80.24 | 79.61 |
| CDY53152 | Canola | nucleus | 59.68 | 66.81 |
| CDY71587 | Canola | cytosol | 14.62 | 53.62 |
| Solyc03g118190.2.1 | Tomato | nucleus | 41.9 | 43.44 |
| KRH63877 | Soybean | nucleus | 32.02 | 40.3 |
| KRH54084 | Soybean | nucleus | 42.29 | 39.78 |
| KRH63879 | Soybean | nucleus | 41.11 | 39.69 |
| PGSC0003DMT400036934 | Potato | nucleus | 42.69 | 39.13 |
| CDY37698 | Canola | mitochondrion | 26.09 | 39.05 |
| VIT_17s0000g00200.t01 | Wine grape | nucleus | 37.15 | 38.21 |
| CDX69647 | Canola | nucleus | 32.41 | 37.79 |
| CDX85656 | Canola | nucleus | 36.76 | 37.35 |
| CDY09787 | Canola | nucleus | 32.02 | 36.32 |
| CDX91131 | Canola | nucleus | 36.36 | 36.22 |
| CDX70498 | Canola | nucleus | 36.76 | 36.05 |
| CDX78517 | Canola | nucleus | 36.36 | 35.66 |
| CDY17191 | Canola | nucleus | 29.64 | 34.72 |
| CDY27952 | Canola | nucleus | 29.25 | 34.26 |
| CDY53788 | Canola | golgi | 26.09 | 33.67 |
| GSMUA_Achr11P... | Banana | nucleus | 33.2 | 32.81 |
| CDY27480 | Canola | nucleus | 20.95 | 27.46 |
| CDY51428 | Canola | nucleus | 20.55 | 26.53 |
| CDX72909 | Canola | nucleus | 18.97 | 25.53 |
| CDX72481 | Canola | nucleus | 22.92 | 22.48 |
| CDX75430 | Canola | nucleus | 22.92 | 22.14 |
| CDY34977 | Canola | nucleus | 20.95 | 21.99 |
| CDY46253 | Canola | nucleus | 22.53 | 21.84 |
| CDY45310 | Canola | nucleus | 22.53 | 21.84 |
| CDY28337 | Canola | nucleus | 20.95 | 21.81 |
| CDX95906 | Canola | nucleus | 20.95 | 21.72 |
| CDX68269 | Canola | nucleus | 18.97 | 21.72 |
| CDX69054 | Canola | nucleus | 22.53 | 21.59 |
| CDX76278 | Canola | nucleus | 22.53 | 21.51 |
| CDX92094 | Canola | nucleus | 20.55 | 21.49 |
| CDY50643 | Canola | nucleus | 18.97 | 21.15 |
| CDY54628 | Canola | nucleus | 20.16 | 20.82 |
| CDX82392 | Canola | nucleus | 20.16 | 20.82 |
| CDY46821 | Canola | nucleus | 31.23 | 20.68 |
| CDY14506 | Canola | nucleus | 32.02 | 20.66 |
| CDY08853 | Canola | nucleus | 32.02 | 20.51 |
| CDY31304 | Canola | nucleus | 30.83 | 20.47 |
| CDX69056 | Canola | nucleus | 16.21 | 20.1 |
| CDX81250 | Canola | nucleus | 31.23 | 19.6 |
| CDX96402 | Canola | nucleus | 18.97 | 19.2 |
| CDX75756 | Canola | nucleus | 23.32 | 16.95 |
| CDY02492 | Canola | nucleus | 20.16 | 16.67 |
| CDX82492 | Canola | nucleus | 22.92 | 16.48 |
| CDY25681 | Canola | nucleus | 19.76 | 16.29 |
| CDY65334 | Canola | nucleus | 23.32 | 15.4 |
| CDX98435 | Canola | nucleus | 22.92 | 15.3 |
| CDY39107 | Canola | nucleus | 23.32 | 15.13 |
| CDX97559 | Canola | nucleus | 23.32 | 13.82 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078ED46 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX98982 |
| ProteinID:CDX98982 | ProteinID:CDX98982.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00107101001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF41 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EB924E | SEG:seg | : | : | : | : |
Description
BnaC09g48530D
Coordinates
chrLK031907:-:991526..992603
Molecular Weight (calculated)
28359.1 Da
IEP (calculated)
6.244
GRAVY (calculated)
-1.035
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPFGAGESD ERKEADDEEN IFPFLSARSQ YDTRAMVSAL TQVIGNQSST HDSNQQPPVE YNQQDPIQHV PPTQDQGNLR KRHYRGVRQR PWGKWAAEIR
101: DPQKAARVWL GTFETAEAAA LAYDEAALKF KGSKAKLNFP ERAQLASNTS TITGLPNYHS SNNQMYYSNP QTNPQTMPYY NQYYYNQYLQ QGGNSNDALS
201: YSLAGGETGG SMYNHQSISN TTSSSSGGSS RQQQEQDYAR FWHFGDSSPS SGF
101: DPQKAARVWL GTFETAEAAA LAYDEAALKF KGSKAKLNFP ERAQLASNTS TITGLPNYHS SNNQMYYSNP QTNPQTMPYY NQYYYNQYLQ QGGNSNDALS
201: YSLAGGETGG SMYNHQSISN TTSSSSGGSS RQQQEQDYAR FWHFGDSSPS SGF
001: MANSGNYGKR PFRGDESDEK KEADDDENIF PFFSARSQYD MRAMVSALTQ VIGNQSSSHD NNQHQPVVYN QQDPNPPAPP TQDQGLLRKR HYRGVRQRPW
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF
Arabidopsis Description
ERF115Ethylene-responsive transcription factor ERF115 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY29]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.