Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031903.1-P | Field mustard | nucleus | 95.29 | 96.04 |
| CDY31304 | Canola | nucleus | 95.55 | 95.8 |
| AT5G64750.1 | Thale cress | nucleus | 81.41 | 79.54 |
| CDY14506 | Canola | nucleus | 80.63 | 78.57 |
| CDY08853 | Canola | nucleus | 81.15 | 78.48 |
| CDX81250 | Canola | nucleus | 76.44 | 72.46 |
| KRH64120 | Soybean | nucleus | 27.75 | 37.72 |
| CDY37698 | Canola | mitochondrion | 15.71 | 35.5 |
| KRH53825 | Soybean | nucleus | 29.32 | 34.78 |
| CDY53152 | Canola | nucleus | 20.42 | 34.51 |
| Solyc04g051360.2.1 | Tomato | nucleus | 27.23 | 34.32 |
| CDY27480 | Canola | nucleus | 17.28 | 34.2 |
| CDY51428 | Canola | nucleus | 17.54 | 34.18 |
| VIT_07s0031g01980.t01 | Wine grape | nucleus | 30.1 | 32.67 |
| GSMUA_Achr6P18020_001 | Banana | nucleus | 22.51 | 32.45 |
| CDY14051 | Canola | nucleus | 21.47 | 32.03 |
| CDY17191 | Canola | nucleus | 18.06 | 31.94 |
| CDY53788 | Canola | golgi | 16.23 | 31.63 |
| CDY27952 | Canola | nucleus | 17.8 | 31.48 |
| CDY55173 | Canola | nucleus | 20.94 | 31.37 |
| CDX70027 | Canola | nucleus | 20.68 | 31.23 |
| CDX98982 | Canola | nucleus | 20.68 | 31.23 |
| HORVU5Hr1G036590.2 | Barley | nucleus | 24.87 | 30.25 |
| KRH43369 | Soybean | nucleus | 23.3 | 30.07 |
| CDX69647 | Canola | nucleus | 17.02 | 29.95 |
| TraesCS5A01G112600.1 | Wheat | nucleus | 25.65 | 29.88 |
| CDX72909 | Canola | nucleus | 14.66 | 29.79 |
| CDX78288 | Canola | nucleus | 19.63 | 29.41 |
| CDY09787 | Canola | nucleus | 17.02 | 29.15 |
| CDX78517 | Canola | nucleus | 19.63 | 29.07 |
| TraesCS5D01G129400.1 | Wheat | nucleus | 24.87 | 29.05 |
| KRH59504 | Soybean | nucleus | 25.92 | 28.7 |
| CDX70498 | Canola | nucleus | 19.11 | 28.29 |
| TraesCS5B01G118200.1 | Wheat | nucleus | 25.13 | 28.15 |
| CDX75430 | Canola | nucleus | 19.11 | 27.86 |
| PGSC0003DMT400050718 | Potato | nucleus | 28.8 | 27.78 |
| CDX85656 | Canola | nucleus | 18.06 | 27.71 |
| CDX69054 | Canola | nucleus | 19.11 | 27.65 |
| CDY46253 | Canola | nucleus | 18.59 | 27.2 |
| CDX76278 | Canola | nucleus | 18.85 | 27.17 |
| CDY45310 | Canola | nucleus | 18.32 | 26.82 |
| CDX91131 | Canola | nucleus | 17.8 | 26.77 |
| CDX72481 | Canola | nucleus | 18.06 | 26.74 |
| CDY34977 | Canola | nucleus | 16.75 | 26.56 |
| CDX68269 | Canola | nucleus | 15.18 | 26.24 |
| CDX69056 | Canola | nucleus | 13.87 | 25.98 |
| CDY28337 | Canola | nucleus | 16.49 | 25.93 |
| CDY54628 | Canola | nucleus | 16.49 | 25.71 |
| CDX82392 | Canola | nucleus | 16.49 | 25.71 |
| CDX92094 | Canola | nucleus | 16.23 | 25.62 |
| CDY50643 | Canola | nucleus | 15.18 | 25.55 |
| CDX95906 | Canola | nucleus | 16.23 | 25.41 |
| OQU82952 | Sorghum | mitochondrion | 21.73 | 25.23 |
| Zm00001d053195_P002 | Maize | nucleus | 21.73 | 25.23 |
| OQU78803 | Sorghum | nucleus | 20.94 | 23.46 |
| CDX82492 | Canola | nucleus | 20.42 | 22.16 |
| CDX96402 | Canola | nucleus | 14.4 | 22.0 |
| CDX75756 | Canola | nucleus | 19.9 | 21.84 |
| CDY02492 | Canola | nucleus | 16.75 | 20.91 |
| CDX98435 | Canola | nucleus | 20.42 | 20.58 |
| Zm00001d023535_P001 | Maize | nucleus | 22.77 | 20.57 |
| CDY25681 | Canola | nucleus | 16.49 | 20.52 |
| CDY65334 | Canola | nucleus | 20.42 | 20.37 |
| CDY39107 | Canola | nucleus | 20.68 | 20.26 |
| Os12t0168100-01 | Rice | nucleus | 18.06 | 20.23 |
| CDX97559 | Canola | nucleus | 20.68 | 18.5 |
| CDY71587 | Canola | cytosol | 2.09 | 11.59 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078IAC0 | UniProt:A0A078IAC0 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY46821 | ProteinID:CDY46821 | ProteinID:CDY46821.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00086262001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EB0773 | SEG:seg | : | : | : | : |
Description
BnaC02g43290DBnaC02g43290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAC0]
Coordinates
chrLK032686:+:148781..150731
Molecular Weight (calculated)
42149.6 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.836
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTLKVANQE DNVGKKAEPT TREDDHRTLS DMDQWFYLFP AEDSHLHRDN ALTPPPSSLM PSFSREMEMS AIVSALTHVV SGNVPPHQLV GRGEGTSNSS
101: SSSGQKRRRE VEEGGGGGGG KAVKAANTLT VDQYFSGGNS SSGVREASSN MSGSGPTYEY TTTINTNTET SSSLNGDQQP RRRYRGVRQR PWGKWAAEIR
201: DPFKAARVWL GTFDNAESAA RAYDEAALRF RGNKAKLNFP ENVKLVRPAP TQSVLQTTAV QTPTQFRKSS STSTLLPLRP AVDSQPLMQP YNLSYSEMAC
301: HQHQFQQHNH QQTMDLYDQM SFPLRFGYTG DSMMQSTSSS SSHSRPLFSP AAVQPSETGY LQDIQWSPDK TSNHNYNNSS SS
101: SSSGQKRRRE VEEGGGGGGG KAVKAANTLT VDQYFSGGNS SSGVREASSN MSGSGPTYEY TTTINTNTET SSSLNGDQQP RRRYRGVRQR PWGKWAAEIR
201: DPFKAARVWL GTFDNAESAA RAYDEAALRF RGNKAKLNFP ENVKLVRPAP TQSVLQTTAV QTPTQFRKSS STSTLLPLRP AVDSQPLMQP YNLSYSEMAC
301: HQHQFQQHNH QQTMDLYDQM SFPLRFGYTG DSMMQSTSSS SSHSRPLFSP AAVQPSETGY LQDIQWSPDK TSNHNYNNSS SS
001: MCVLKVANQE DNVGKKAESI RDDDHRTLSE IDQWLYLFAA EDDHHRHSFP TQQPPPSSSS SSLISGFSRE MEMSAIVSAL THVVAGNVPQ HQQGGGEGSG
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
101: EGTSNSSSSS GQKRRREVEE GGAKAVKAAN TLTVDQYFSG GSSTSKVREA SSNMSGPGPT YEYTTTATAS SETSSFSGDQ PRRRYRGVRQ RPWGKWAAEI
201: RDPFKAARVW LGTFDNAESA ARAYDEAALR FRGNKAKLNF PENVKLVRPA STEAQPVHQT AAQRPTQSRN SGSTTTLLPI RPASNQSVHS QPLMQSYNLS
301: YSEMARQQQQ FQQHHQQSLD LYDQMSFPLR FGHTGGSMMQ STSSSSSHSR PLFSPAAVQP PPESASETGY LQDIQWPSDK TSNNYNNSPS S
Arabidopsis Description
ABR1Ethylene-responsive transcription factor ABR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGF8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.