Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021543.1-P | Field mustard | nucleus | 92.82 | 99.18 |
| CDY65334 | Canola | nucleus | 93.59 | 95.3 |
| AT3G14230.1 | Thale cress | nucleus | 76.15 | 78.36 |
| CDX98435 | Canola | nucleus | 75.38 | 77.57 |
| CDX75756 | Canola | nucleus | 68.72 | 77.01 |
| CDX82492 | Canola | nucleus | 68.21 | 75.57 |
| CDX97559 | Canola | nucleus | 77.69 | 70.96 |
| CDY25681 | Canola | nucleus | 50.26 | 63.84 |
| CDY02492 | Canola | nucleus | 50.0 | 63.73 |
| TraesCS5D01G320800.1 | Wheat | nucleus | 22.82 | 44.95 |
| TraesCS5A01G314600.1 | Wheat | nucleus | 22.82 | 43.63 |
| CDY27480 | Canola | nucleus | 21.28 | 43.01 |
| TraesCS5B01G315500.2 | Wheat | nucleus | 23.08 | 42.86 |
| CDY51428 | Canola | nucleus | 21.54 | 42.86 |
| Os01t0313300-01 | Rice | nucleus | 22.31 | 42.03 |
| CDX72909 | Canola | nucleus | 19.74 | 40.96 |
| CDX68269 | Canola | nucleus | 22.31 | 39.37 |
| EES00666 | Sorghum | nucleus | 22.56 | 38.77 |
| Zm00001d009103_P001 | Maize | nucleus | 22.31 | 37.83 |
| Zm00001d040651_P001 | Maize | nucleus | 22.82 | 37.55 |
| CDY50643 | Canola | nucleus | 21.28 | 36.56 |
| CDX96402 | Canola | nucleus | 22.56 | 35.2 |
| CDY34977 | Canola | nucleus | 21.54 | 34.85 |
| CDY28337 | Canola | nucleus | 21.28 | 34.16 |
| CDX95906 | Canola | nucleus | 21.28 | 34.02 |
| CDX92094 | Canola | nucleus | 21.03 | 33.88 |
| CDY54628 | Canola | nucleus | 21.28 | 33.88 |
| CDX82392 | Canola | nucleus | 21.03 | 33.47 |
| CDY37698 | Canola | mitochondrion | 14.36 | 33.14 |
| HORVU5Hr1G080790.1 | Barley | nucleus | 23.08 | 30.1 |
| CDY53788 | Canola | golgi | 14.62 | 29.08 |
| CDY17191 | Canola | nucleus | 14.87 | 26.85 |
| CDY27952 | Canola | nucleus | 14.87 | 26.85 |
| Zm00001d007033_P001 | Maize | plastid | 17.69 | 24.3 |
| CDX69647 | Canola | nucleus | 13.08 | 23.5 |
| CDY14051 | Canola | nucleus | 15.38 | 23.44 |
| CDX98982 | Canola | nucleus | 15.13 | 23.32 |
| CDX70027 | Canola | nucleus | 15.13 | 23.32 |
| CDY55173 | Canola | nucleus | 15.13 | 23.14 |
| CDY53152 | Canola | nucleus | 13.33 | 23.01 |
| CDY09787 | Canola | nucleus | 13.08 | 22.87 |
| CDX78288 | Canola | nucleus | 14.87 | 22.75 |
| CDX78517 | Canola | nucleus | 14.62 | 22.09 |
| CDX70498 | Canola | nucleus | 14.62 | 22.09 |
| CDX85656 | Canola | nucleus | 13.85 | 21.69 |
| CDX91131 | Canola | nucleus | 13.85 | 21.26 |
| CDY31304 | Canola | nucleus | 20.51 | 21.0 |
| CDY46821 | Canola | nucleus | 20.26 | 20.68 |
| CDY45310 | Canola | nucleus | 13.59 | 20.31 |
| CDX75430 | Canola | nucleus | 13.59 | 20.23 |
| CDY14506 | Canola | nucleus | 20.26 | 20.15 |
| CDX76278 | Canola | nucleus | 13.59 | 20.0 |
| CDX72481 | Canola | nucleus | 13.08 | 19.77 |
| CDY08853 | Canola | nucleus | 20.0 | 19.75 |
| CDX69054 | Canola | nucleus | 13.33 | 19.7 |
| CDY46253 | Canola | nucleus | 13.08 | 19.54 |
| CDX81250 | Canola | nucleus | 18.72 | 18.11 |
| CDX69056 | Canola | nucleus | 9.23 | 17.65 |
| CDY71587 | Canola | cytosol | 0.51 | 2.9 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HMK7 | UniProt:A0A078HMK7 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY39107 | ProteinID:CDY39107 | ProteinID:CDY39107.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00067262001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF66 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEC63F | SEG:seg | : | : | : | : |
Description
BnaA01g29490DBnaA01g29490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMK7]
Coordinates
chrLK032440:-:158362..160701
Molecular Weight (calculated)
43421.1 Da
IEP (calculated)
4.609
GRAVY (calculated)
-0.756
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGGAIISDF IPPPSSRRVT SEFLWPDLKK NKGKASKKRS DFFDLDDEFE ADFQGFEDDD ASFDCEDDDE DDDVFAKVKP FVFTATTKPV ASPPTATGSV
101: SGKKIIESGG QAEKSAKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGSKAKVNFP EESNNNRSVS QKRPSAKKLV
201: AKPNQSPALV QQPMSQYCNN SFGDVSFVEE KPQMYNNQFG LANSYNNHYF SSDQGSNSFD CSEFGWSDHG PKTPEISSML VGNNQAPFTE ETNAAKKLKP
301: SSDDGTSNQS DDLMAYLDNA LWESPSPLEV EAMLGVDAVA VTQGEENPMD LWSLDDINYM LEGDFAVEGG MVQVTTWSLL HRLLSYMNVF
101: SGKKIIESGG QAEKSAKRKR KNQYRGIRQR PWGKWAAEIR DPRKGSREWL GTFDTAEEAA RAYDAAARRI RGSKAKVNFP EESNNNRSVS QKRPSAKKLV
201: AKPNQSPALV QQPMSQYCNN SFGDVSFVEE KPQMYNNQFG LANSYNNHYF SSDQGSNSFD CSEFGWSDHG PKTPEISSML VGNNQAPFTE ETNAAKKLKP
301: SSDDGTSNQS DDLMAYLDNA LWESPSPLEV EAMLGVDAVA VTQGEENPMD LWSLDDINYM LEGDFAVEGG MVQVTTWSLL HRLLSYMNVF
001: MCGGAIISDF IPPPRSLRVT NEFIWPDLKN KVKASKKRSN KRSDFFDLDD DFEADFQGFK DDSAFDCEDD DDVFVNVKPF VFTATTKPVA SAFVSTGSAY
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
101: AKKTVESAEQ AEKSSKRKRK NQYRGIRQRP WGKWAAEIRD PRKGSREWLG TFDTAEEAAR AYDAAARRIR GTKAKVNFPE EKNPSVVSQK RPSAKTNNLQ
201: KSVAKPNKSV TLVQQPTHLS QQYCNNSFDN SFGDMSFMEE KPQMYNNQFG LTNSFDAGGN NGYQYFSSDQ GSNSFDCSEF GWSDHGPKTP EISSMLVNNN
301: EASFVEETNA AKKLKPNSDE SDDLMAYLDN ALWDTPLEVE AMLGADAGAV TQEEENPVEL WSLDEINFML EGDF
Arabidopsis Description
RAP2-2Ethylene-responsive transcription factor RAP2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.