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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028703.1-P Field mustard nucleus 99.61 99.61
CDY14051 Canola nucleus 94.51 94.14
CDX98982 Canola nucleus 79.61 80.24
CDX70027 Canola nucleus 79.61 80.24
CDX78288 Canola nucleus 79.22 79.22
AT5G07310.1 Thale cress nucleus 81.57 79.09
CDY53152 Canola nucleus 54.9 61.95
CDY71587 Canola cytosol 13.73 50.72
Solyc03g118190.2.1 Tomato nucleus 40.39 42.21
PGSC0003DMT400036934 Potato nucleus 41.18 38.04
KRH54084 Soybean nucleus 39.61 37.55
KRH63879 Soybean nucleus 38.43 37.4
CDY37698 Canola mitochondrion 24.71 37.28
KRH63877 Soybean nucleus 29.02 36.82
CDX85656 Canola nucleus 35.29 36.14
CDX69647 Canola nucleus 30.59 35.94
CDX91131 Canola nucleus 35.29 35.43
VIT_17s0000g00200.t01 Wine grape nucleus 34.12 35.37
CDX70498 Canola nucleus 35.69 35.27
CDY09787 Canola nucleus 30.2 34.53
CDX78517 Canola nucleus 34.9 34.5
GSMUA_Achr11P... Banana nucleus 34.51 34.38
CDY17191 Canola nucleus 28.63 33.8
CDY27952 Canola nucleus 28.24 33.33
CDY53788 Canola golgi 24.71 32.14
CDY51428 Canola nucleus 21.57 28.06
CDY27480 Canola nucleus 21.18 27.98
CDX72909 Canola nucleus 19.22 26.06
CDY34977 Canola nucleus 21.57 22.82
CDX92094 Canola nucleus 21.57 22.73
CDY28337 Canola nucleus 21.57 22.63
CDX68269 Canola nucleus 19.61 22.62
CDX95906 Canola nucleus 21.57 22.54
CDX75430 Canola nucleus 22.75 22.14
CDX72481 Canola nucleus 22.35 22.09
CDY50643 Canola nucleus 19.61 22.03
CDX69054 Canola nucleus 22.75 21.97
CDY46253 Canola nucleus 22.35 21.84
CDY54628 Canola nucleus 20.78 21.63
CDX82392 Canola nucleus 20.78 21.63
CDX76278 Canola nucleus 22.35 21.51
CDY45310 Canola nucleus 21.96 21.46
CDY14506 Canola nucleus 32.55 21.17
CDY08853 Canola nucleus 32.55 21.01
CDY46821 Canola nucleus 31.37 20.94
CDY31304 Canola nucleus 30.98 20.73
CDX96402 Canola nucleus 20.0 20.4
CDX69056 Canola nucleus 16.08 20.1
CDX81250 Canola nucleus 30.98 19.6
CDX75756 Canola nucleus 23.14 16.95
CDX82492 Canola nucleus 22.75 16.48
CDY02492 Canola nucleus 19.61 16.34
CDY25681 Canola nucleus 19.61 16.29
CDY65334 Canola nucleus 23.14 15.4
CDX98435 Canola nucleus 22.75 15.3
CDY39107 Canola nucleus 23.14 15.13
CDX97559 Canola nucleus 23.14 13.82
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10GO:A0A078J0G1UniProt:A0A078J0G1InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
EnsemblPlants:CDY55173ProteinID:CDY55173ProteinID:CDY55173.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00016469001InterPro:IPR001471InterPro:IPR036955PFAM:PF00847
PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190PANTHER:PTHR31190:SF41SMART:SM00380SUPFAM:SSF54171
UniParc:UPI0004EE219DSEG:seg::::
Description
BnaAnng13660DBnaAnng13660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0G1]
Coordinates
chrLK033380:+:9058..9941
Molecular Weight (calculated)
28840.5 Da
IEP (calculated)
6.251
GRAVY (calculated)
-1.158
Length
255 amino acids
Sequence
(BLAST)
001: MANQRNYGKR PSRAGESEKK ETEDEENIFP FFSDRSQYDT RAMVSALTQV IGNQSSTHDD NQHHSDEYNQ QDSTQPISPK QDQGDLRKRH YRGVRQRPWG
101: KWAAEIRDPQ KGARVWLGTF ETAEAAAIAY DEAALKFKGS KAKLNFPERA QLVSNSNSTI TGLPNYFSSN NQVYYSNPQP TPYDNQYYYN QYLQQGGYSN
201: DALSYDMAGG ETGGLMYNHQ TLSTTTSSSS GGSSRPQEDY TRYLHFGDSS PYSGF
Best Arabidopsis Sequence Match ( AT5G07310.1 )
(BLAST)
001: MANSGNYGKR PFRGDESDEK KEADDDENIF PFFSARSQYD MRAMVSALTQ VIGNQSSSHD NNQHQPVVYN QQDPNPPAPP TQDQGLLRKR HYRGVRQRPW
101: GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG
201: GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY LRFGDSSPPN SGF
Arabidopsis Description
ERF115Ethylene-responsive transcription factor ERF115 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY29]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.