CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08660	Soybean	nucleus	77.98	85.21
KRG91682	Soybean	nucleus	29.7	52.69
KRH35113	Soybean	nucleus, plastid	28.89	52.38
KRH59733	Soybean	cytosol, mitochondrion, nucleus	11.31	45.9
Solyc12g056590.1.1	Tomato	nucleus	26.87	42.9
PGSC0003DMT400048407	Potato	nucleus	30.51	38.23
KRH70063	Soybean	nucleus	17.17	37.28
KRH08410	Soybean	nucleus	17.78	36.82
AT5G50080.2	Thale cress	nucleus	16.16	34.93
KRH63877	Soybean	nucleus	13.94	34.33
KRH64120	Soybean	nucleus	18.99	33.45
KRH63879	Soybean	nucleus	17.58	33.21
KRH54084	Soybean	nucleus	17.98	33.09
KRH01504	Soybean	nucleus	16.16	33.06
KRH50274	Soybean	nucleus	14.55	31.3
KRH06816	Soybean	nucleus	15.96	30.38
KRH71142	Soybean	nucleus	13.13	30.23
KRH45195	Soybean	nucleus	16.77	29.96
KRH53825	Soybean	nucleus	18.99	29.19
KRH12100	Soybean	nucleus	12.53	27.8
KRH43369	Soybean	nucleus	16.57	27.7
KRH59504	Soybean	nucleus	19.19	27.54
GSMUA_Achr10P...	Banana	nucleus	15.96	26.87
KRG96472	Soybean	mitochondrion	11.52	25.79
KRH37061	Soybean	nucleus	12.12	25.32
KRG94719	Soybean	nucleus	16.36	23.75
KRG97290	Soybean	nucleus	13.33	22.07
KRH69270	Soybean	nucleus	12.32	20.33
KRH31850	Soybean	nucleus	12.32	20.07
KRH69017	Soybean	nucleus	13.74	19.71
KRH47694	Soybean	nucleus	14.34	18.11
KRH06265	Soybean	nucleus	13.74	17.8

Protein Annotations

EntrezGene:100804843	MapMan:15.5.7.1	Gene3D:3.30.730.10	EMBL:ACUP02000762	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_02G080200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7K715	EnsemblPlants:KRH70269	ProteinID:KRH70269	ProteinID:KRH70269.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF66	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI000295FDCD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:6909163..6912120

Molecular Weight (calculated)

53708.6 Da

IEP (calculated)

9.182

GRAVY (calculated)

-0.524

Length

495 amino acids

Sequence
(BLAST)

001: MLKFGTSLLY NRFILNSISK GVLRRNHTRE ILGGSWQFKF GPKIVRKKTI VYIVFMSLLT VAHQRGSGEF MRFTESHGGG GGGDGDGEYG YGHDDGRGGG
101: GGGSLGLNFN QVMQQGEVTT QGGTLVSGYN RGDPDLREMV SALTHVVVSS GSGQRSTEWI QQSGFPMMSA SSLSCLSSFS SPSSSGASWV GHKRGREEEE
201: SSSSHNMIQQ QQQSAPRLFR NIGDFMVPSQ GDSSSATEEA PTSTTTSVTA VATTVTETPP PPGGGERRRK YRGVRQRPWG KWAAEIRDPH KAARVWLGTF
301: DTEEAAARAY DEAALRFRGN RAKLNFPENV RAVPPIQPFQ ATTRLTVSDS TTSQFRPLVT ETPPFIQQPQ IQGSSDLIRD YLQYSQLLQS DFQQQQIQQQ
401: SPSSLLQQLY YNAQLASLQS PSVLSSSPSF SSSVSPTPFP LFSTSAQFSS ASFPMFSSQQ MGYFQLPESC PPAGGVPEFP PSTWSGTSGQ PPPSG

Best Arabidopsis Sequence Match ( AT5G50080.2 )
(BLAST)

001: MSAMVSALTQ VVSARSQTEA EGAHSQTEAE GAHSSSSSAG HKRGWLGIDS APIPSSFARV DSSHNPIEES MSKAFPEEAR EKKRRYRGVR QRPWGKWAAE
101: IRDPHRAARV WLGTFDTAEA AARAYDEAAL RFRGNKAKLN FPEDVRILPP PPPLLRSPAD TVANKAEEDL INYWSYTKLL QSSGQRSFLE RGQEESSNIF
201: EHSPMEQPLP PSSSGPSSSN FPAPSLPNT

Arabidopsis Description

ERF110Ethylene response factor 110 [Source:UniProtKB/TrEMBL;Acc:G8IQH2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.